RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 FAM131BQ86XD5 332 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 PROSER1Q86XN7 944 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 KATNAL2Q8IYT4 538 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 TEKT4Q8WW24 435 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 KRT35Q92764 455 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 IRF7Q92985 503 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 TCEAL3Q969E4 200 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 PBKQ96KB5 322 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 EDEM2Q9BV94 578 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 WDCPQ9H6R7 721 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 BRD9Q9H8M2 597 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 SNX12Q9UMY4 172 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 HBS1LQ9Y450 684 aaKnown RBP16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 SAR1BQ9Y6B6 198 aa16.7■□□□□ 0.26
NDFIP1-204ENST00000509436 TRAV19A0A0A6YYK7 116 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SLC12A8A0AV02 714 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 KCNK3O14649 394 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MDM4O15151 490 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MSI1O43347 362 aaKnown RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 COCHO43405 550 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 TBX18O95935 607 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 APOEP02649 317 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 KRT1P04264 644 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MBL2P11226 248 aaPredicted RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 TCF4P15884 667 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 CCR1P32246 355 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 CETN2P41208 172 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MLLT6P55198 1093 aaPredicted RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 COG7P83436 770 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 CYP4F8P98187 520 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MTA1Q13330 715 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 ERMARDQ5T6L9 678 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 Q6ZS52 159 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 PSTKQ8IV42 348 aaKnown RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SHKBP1Q8TBC3 707 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 NTAN1Q96AB6 310 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 RBM41Q96IZ5 413 aaKnown RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 ZC3H10Q96K80 434 aaKnown RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 PEBP4Q96S96 227 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 OSBPL9Q96SU4 736 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 CACNA2D2Q9NY47 1150 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 CALCOCO1Q9P1Z2 691 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 MRPS23Q9Y3D9 190 aaKnown RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 NUP210Q8TEM1 1887 aaPredicted RBP16.69■□□□□ 0.26
NDFIP1-204ENST00000509436 C2orf78A6NCI8 922 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 NRG2O14511 850 aaPredicted RBP16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 FANCGO15287 622 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 RARAP10276 462 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 HDCP19113 662 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 IL1R2P27930 398 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 MARCKSL1P49006 195 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 PEX5P50542 639 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 EIF4EBP2Q13542 120 aaPredicted RBP16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 LRRC32Q14392 662 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 KRT81Q14533 505 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 EFHC2Q5JST6 749 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 PRSS36Q5K4E3 855 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 RCOR2Q8IZ40 523 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 CCDC185Q8N715 623 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 EXD1Q8NHP7 514 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 HSPH1Q92598 858 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 PLD4Q96BZ4 506 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 PSMB7Q99436 277 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 SNRNP25Q9BV90 132 aaKnown RBP16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 TRMT61BQ9BVS5 477 aaKnown RBP16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 CARD9Q9H257 536 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 AP4E1Q9UPM8 1137 aa16.68■□□□□ 0.26
NDFIP1-204ENST00000509436 ARNTLO00327 626 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 CES2O00748 559 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 RPP40O75818 363 aaKnown RBP16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 ZRANB2O95218 330 aaKnown RBP eCLIP16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 OLFM2O95897 454 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 ADRA1BP35368 520 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 CCR2P41597 374 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 SCAPQ12770 1279 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 PDK2Q15119 407 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 TEAD2Q15562 447 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 ZC3H12AQ5D1E8 599 aaKnown RBP16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 GPR158Q5T848 1215 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 TXNRD3NBQ6F5E7 133 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 CCDC50Q8IVM0 306 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 MAP7D3Q8IWC1 876 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 UNC45BQ8IWX7 931 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 MAB21L3Q8N8X9 362 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 ATP6V0D2Q8N8Y2 350 aa16.67■□□□□ 0.26
NDFIP1-204ENST00000509436 KCTD6Q8NC69 237 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms