RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 KCNU1A8MYU2 1149 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 MID1O15344 667 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 GRAP2O75791 330 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 RNASEH2AO75792 299 aaKnown RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 ZNF883P0CG24 379 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 SLC2A3P11169 496 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 CD27P26842 260 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 KRT9P35527 623 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 NUMBP49757 651 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 SNX16P57768 344 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 PITX1P78337 314 aaPredicted RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 KIF19Q2TAC6 998 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 EFHC1Q5JVL4 640 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 C9orf64Q5T6V5 341 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 USP30Q70CQ3 517 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 APCDD1Q8J025 514 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 WDTC1Q8N5D0 677 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 KDM1BQ8NB78 822 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 ZCCHC14Q8WYQ9 949 aaKnown RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 MYO19Q96H55 970 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 NOX5Q96PH1 765 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 TMEM121BQ9BXQ6 578 aaPredicted RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 SYNCQ9H7C4 482 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 DDIT4Q9NX09 232 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 SLCO3A1Q9UIG8 710 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 PCOLCE2Q9UKZ9 415 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 SLCO1B1Q9Y6L6 691 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 PCDH15Q96QU1 1955 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 KCNK3O14649 394 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 GLI1P08151 1106 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 PDGFRAP16234 1089 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 PON1P27169 355 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 CCR1P32246 355 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 SLC8A1P32418 973 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 C21orf59P57076 290 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 CST6Q15828 149 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 RABGAP1LQ5R372 815 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 KIAA0895LQ68EN5 471 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
TPM3-219ENST00000509409 RAB44Q7Z6P3 723 aaPredicted RBP15.89■□□□□ 0.13
TPM3-219ENST00000509409 CIR1Q86X95 450 aaPredicted RBP15.89■□□□□ 0.13
TPM3-219ENST00000509409 STK40Q8N2I9 435 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 MLKLQ8NB16 471 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 CPXM1Q96SM3 734 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 NEUROG2Q9H2A3 272 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 PDCL3Q9H2J4 239 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 FRYQ5TBA9 3013 aa15.89■□□□□ 0.13
TPM3-219ENST00000509409 GTPBP10A4D1E9 387 aaKnown RBP15.88■□□□□ 0.13
TPM3-219ENST00000509409 LRRC72A6NJI9 287 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 GOLGA8CPA6NN73 597 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 HSF2BPO75031 334 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 IGLV3-25P01717 112 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 C7P10643 843 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 GRIA4P48058 902 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 PSMD8P48556 350 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 GALCP54803 685 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 SULT2A1Q06520 285 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 NME3Q13232 169 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 SLC12A1Q13621 1099 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 NCEH1Q6PIU2 408 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 LAYNQ6UX15 382 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 CCAR2Q8N163 923 aaKnown RBP15.88■□□□□ 0.13
TPM3-219ENST00000509409 ADAMTS14Q8WXS8 1223 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 SHC3Q92529 594 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 SKA1Q96BD8 255 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 RPRD1AQ96P16 312 aaPredicted RBP15.88■□□□□ 0.13
TPM3-219ENST00000509409 CDC6Q99741 560 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 ASNSD1Q9NWL6 643 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 PCDHGC3Q9UN70 934 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 PCDHGB2Q9Y5G2 931 aa15.88■□□□□ 0.13
TPM3-219ENST00000509409 FAM221BA6H8Z2 402 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 FOXN3O00409 490 aaPredicted RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 FLRT2O43155 660 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 CBFA2T3O75081 653 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 IL1BP01584 269 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 MZF1P28698 734 aaPredicted RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 STK19P49842 368 aaPredicted RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 OXCT1P55809 520 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 ARID5BQ14865 1188 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 ACCSLQ4AC99 568 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 TTC39BQ5VTQ0 682 aaPredicted RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 FAM183BPQ6ZVS7 135 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
TPM3-219ENST00000509409 SLCO6A1Q86UG4 719 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 IRF2BP1Q8IU81 584 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 FAM114A1Q8IWE2 563 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 C1orf131Q8NDD1 294 aaKnown RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 OR2T34Q8NGX1 318 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 OR14C36Q8NHC7 312 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 SLC2A13Q96QE2 648 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 FAM129BQ96TA1 746 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 PRMT1Q99873 361 aaKnown RBP15.87■□□□□ 0.13
TPM3-219ENST00000509409 ACE2Q9BYF1 805 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms