RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 FAM72BQ86X60 149 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ZNF280BQ86YH2 543 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 CTAGE3PQ8IX95 158 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 FAM126BQ8IXS8 530 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 C4orf33Q8N1A6 199 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 AGGF1Q8N302 714 aaeCLIP9.48□□□□□ -0.89
HTT-205ENST00000509043 PPM1NQ8N819 430 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 GDAP1Q8TB36 358 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 HASPINQ8TF76 798 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 ATP2A3Q93084 1043 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 TEKT5Q96M29 485 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 IL22Q9GZX6 179 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 NSMCE4AQ9NXX6 385 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
HTT-205ENST00000509043 PRKAG3Q9UGI9 489 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
HTT-205ENST00000509043 PTPRDP23468 1912 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 KCNU1A8MYU2 1149 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 EDF1O60869 148 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 SPAG7O75391 227 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 DCTN3O75935 186 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ATP5HO75947 161 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 MAP3K6O95382 1288 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 TGDSO95455 350 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 PSMB4P28070 264 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 FOXN2P32314 431 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 HADHAP40939 763 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 SKIV2L2P42285 1042 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 MLLT6P55198 1093 aaPredicted RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 MGAT5Q09328 741 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 NIPAL4Q0D2K0 466 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 GPR17Q13304 367 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ANO4Q32M45 955 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 CTXN3Q4LDR2 81 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 KCTD11Q693B1 232 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 KYAT3Q6YP21 454 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 ANKS3Q6ZW76 656 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 SCD5Q86SK9 330 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 NPAS4Q8IUM7 802 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ZNF276Q8N554 614 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ATPAF2Q8N5M1 289 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ATP6V0D2Q8N8Y2 350 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 TCP10LQ8TDR4 215 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 DEPDC1BQ8WUY9 529 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 DPF3Q92784 378 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 MAGEB5Q9BZ81 275 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ANLNQ9NQW6 1124 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
HTT-205ENST00000509043 SEPT10Q9P0V9 454 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 TXNDC16Q9P2K2 825 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 HSFX1Q9UBD0 423 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 PHTF1Q9UMS5 762 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 MFHAS1Q9Y4C4 1052 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 USH1CQ9Y6N9 552 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
HTT-205ENST00000509043 FAM237BA0A1B0GVD1 139 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 WDR27A2RRH5 827 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CFAP73A6NFT4 308 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 ARHGAP42A6NI28 874 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 I6L893 689 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 MATN3O15232 486 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 BIRC5O15392 142 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 PAGE1O75459 146 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 DNAJC8O75937 253 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 USP1O94782 785 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CXCL10P02778 98 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 ATP5BP06576 529 aaKnown RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 TROVE2P10155 538 aaKnown RBP eCLIP9.46□□□□□ -0.9
HTT-205ENST00000509043 RHOQP17081 205 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 YWHAQP27348 245 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CRHR1P34998 444 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 ETV4P43268 484 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 NDST2P52849 883 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 GEMP55040 296 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 RING1Q06587 406 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CDK18Q07002 472 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CDH17Q12864 832 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CRYMQ14894 314 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 SLC1A5Q15758 541 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 INSCQ1MX18 579 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 GRTP1Q5TC63 336 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 AFMIDQ63HM1 303 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 ATG16L1Q676U5 607 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CASC4Q6P4E1 433 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 PRPF39Q86UA1 669 aaKnown RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 TMEM135Q86UB9 458 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 LCA5Q86VQ0 697 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 SCN4BQ8IWT1 228 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms