RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ANAPC4Q9UJX5 808 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 CNTN6Q9UQ52 1028 aa5.9□□□□□ -1.46
TOPBP1-206ENST00000508524 LMTK3Q96Q04 1460 aa5.9□□□□□ -1.47
TOPBP1-206ENST00000508524 IGKV2D-30A0A075B6S6 120 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 FAM90A8PA6NJQ4 464 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 SMAD6O43541 496 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 FAM90A13PP0C7W8 464 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 FAM90A24PP0C7X0 464 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 TBXAS1P24557 533 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 TKTP29401 623 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 SERPINB3P29508 390 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 CIITAP33076 1130 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 KRTAP10-9P60411 292 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 RBM6P78332 1123 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 PTGR1Q14914 329 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 BTBD16Q32M84 506 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 TRAPPC11Q7Z392 1133 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 CLEC4CQ8WTT0 213 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 OBP2BQ9NPH6 170 aa5.89□□□□□ -1.47
TOPBP1-206ENST00000508524 CXorf65A6NEN9 183 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 FFAR2O15552 330 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 NFATC1O95644 943 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 IFIT2P09913 472 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 HOXB6P17509 224 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 P2RX3P56373 397 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 PPATQ06203 517 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 PTK2BQ14289 1009 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 TTC39AQ5SRH9 613 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 LVRNQ6Q4G3 990 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 CRELD2Q6UXH1 353 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 ACRBPQ8NEB7 543 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 RSC1A1Q92681 617 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 LYZL4Q96KX0 146 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 ADAD1Q96M93 576 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 ZNF580Q9UK33 172 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 LZTS1Q9Y250 596 aa5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 ZNF608Q9ULD9 1512 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-206ENST00000508524 A0A087WV62 115 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 LGALS16A8MUM7 142 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 NEURL1O76050 574 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 LARGE1O95461 756 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 CCKBRP32239 447 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 GAD2Q05329 585 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 CYB5R4Q7L1T6 521 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 MEPCEQ7L2J0 689 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 TMEM174Q8WUU8 243 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 ASB5Q8WWX0 329 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 IP6K1Q92551 441 aa5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 CENPIQ92674 756 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 SORBS1Q9BX66 1292 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 MAGED2Q9UNF1 606 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 URB2Q14146 1524 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3DA0A087WVF3 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3IA0A087WXS9 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3EA0A087X179 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3KA0A087X1G2 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3BA6NDS4 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3FA6NER0 549 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 MBD3L5A6NJ08 208 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3LB9A6J9 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 MCIDASD6RGH6 385 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 IFNA2P01563 188 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3HP0C7X1 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 GYS1P13807 737 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 ADPRHP54922 357 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 RNASELQ05823 741 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 GALNT1Q10472 559 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 ZNF569Q5MCW4 686 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 C10orf76Q5T2E6 689 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 RUSC1-AS1Q66K80 236 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3GQ6DHY5 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3CQ6IPX1 549 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 GGT6Q6P531 493 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TOGARAM2Q6ZUX3 1019 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 GPSM1Q86YR5 675 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TBC1D3Q8IZP1 549 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 ZNF527Q8NB42 609 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 B4GALNT2Q8NHY0 566 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 HMGB4Q8WW32 186 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 INPP5DQ92835 1189 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 EID2BQ96D98 161 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 KATNAL1Q9BW62 490 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 WDR12Q9GZL7 423 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 ZNF700Q9H0M5 742 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 MAP6D1Q9H9H5 199 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 MRPL44Q9H9J2 332 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 FBXO4Q9UKT5 387 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 TNFSF13BQ9Y275 285 aa5.86□□□□□ -1.47
TOPBP1-206ENST00000508524 PEG3Q9GZU2 1588 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 CEP164Q9UPV0 1460 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 KCNJ18B7U540 433 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 H0YGN5 161 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 MDM4O15151 490 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 SPTLC2O15270 562 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 GALNT3Q14435 633 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 PFKFB4Q16877 469 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms