RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZNF883P0CG24 379 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 PNMA6AP0CW24 399 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 MATKP42679 507 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 MTIF2P46199 727 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CSNK1EP49674 416 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 AFF3P51826 1226 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 ST8SIA6P61647 398 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CST6Q15828 149 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 HLA-BQ31612 363 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 PTPN20Q4JDL3 420 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 C9orf64Q5T6V5 341 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 OLFML1Q6UWY5 402 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 LAYNQ6UX15 382 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM183BPQ6ZVS7 135 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 USP30Q70CQ3 517 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CCDC117Q8IWD4 279 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 APCDD1Q8J025 514 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 DEFB106AQ8N104 65 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 KDF1Q8NAX2 398 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 MLKLQ8NB16 471 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 BIRC7Q96CA5 298 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 PPP1R13BQ96KQ4 1090 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 TM9SF3Q9HD45 589 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 OSGEPQ9NPF4 335 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 DDIT4Q9NX09 232 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 SYNJ2BP-COX16A0A087WUM0 186 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 EDDM13A0A1B0GTR0 161 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 TTC34A8MYJ7 566 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 MID1O15344 667 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 GRAP2O75791 330 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 TRIM16O95361 564 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 MOCS3O95396 460 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 ERBB2P04626 1255 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 IGHV4-34P06331 123 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 CD27P26842 260 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 CCR1P32246 355 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 CLCN1P35523 988 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 GRIA4P48058 902 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 STK19P49842 368 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 CDK17Q00537 523 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 ECT2LQ008S8 904 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 CENPCQ03188 943 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 TRIP6Q15654 476 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 KIF19Q2TAC6 998 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 MIIPQ5JXC2 388 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 TTC39BQ5VTQ0 682 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 OTUD1Q5VV17 481 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 DPY19L2P1Q6NXN4 242 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 IL27RAQ6UWB1 636 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 C11orf57Q6ZUT1 292 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 RAB44Q7Z6P3 723 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC47A2Q86VL8 602 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 ATP6V0D2Q8N8Y2 350 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 RPL10LQ96L21 214 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 TM7SF3Q9NS93 570 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 COX16Q9P0S2 106 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 SLCO3A1Q9UIG8 710 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 DNAJC12Q9UKB3 198 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 PCOLCE2Q9UKZ9 415 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 ZMIZ1Q9ULJ6 1067 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 SCML1Q9UN30 329 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
HMGCS1-205ENST00000508319 A0A1B0GVM2 712 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 A0A1W2PP55 124 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 TARSL2A2RTX5 802 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 TMEM8BA6NDV4 472 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 TCAF2A6NFQ2 919 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 C10orf142B7Z368 130 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 DAB1O75553 588 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 FSBPO95073 299 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 FTH1P19P0C7X4 201 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC2A3P11169 496 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 PDGFRAP16234 1089 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 ABCB4P21439 1286 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 NUMBP49757 651 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 IRAK1P51617 712 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 PTK2Q05397 1052 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CXorf57Q6NSI4 855 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 FBXL22Q6P050 247 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 MMAAQ8IVH4 418 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CCAR2Q8N163 923 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CHCHD4Q8N4Q1 142 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 BAHD1Q8TBE0 780 aaPredicted RBP13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 PTPRN2Q92932 1015 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 NOX5Q96PH1 765 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 FBXL12Q9NXK8 326 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms