RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 RABEPKQ7Z6M1 372 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 TMPRSS6Q8IU80 811 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 C12orf50Q8NA57 414 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 MYEOVQ96EZ4 313 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 SIPA1Q96FS4 1042 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 CFAP57Q96MR6 1250 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 TTYH3Q9C0H2 523 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 USP36Q9P275 1121 aaKnown RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 VANGL2Q9ULK5 521 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 FRYLO94915 3013 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 IGHV1OR15-9A0A0B4J2B8 117 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 C2CD4BA6NLJ0 364 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 SIGLEC16A6NMB1 481 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 ADCY5O95622 1261 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 IGLV3-19P01714 112 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 TNFAIP3P21580 790 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 ID4P47928 161 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 ECT2LQ008S8 904 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 CREB5Q02930 508 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 FSCBQ5H9T9 825 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 ACAD10Q6JQN1 1059 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 NETO1Q8TDF5 533 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 CYB5D2Q8WUJ1 264 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 RLN3Q8WXF3 142 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 MKRN2Q9H000 416 aaKnown RBP20.49■□□□□ 0.87
SFXN1-209ENST00000508290 ITM2CQ9NQX7 267 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 INTS6Q9UL03 887 aaKnown RBP20.49■□□□□ 0.87
SFXN1-209ENST00000508290 SCML1Q9UN30 329 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 INVSQ9Y283 1065 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 TBC1D30Q9Y2I9 924 aa20.49■□□□□ 0.87
SFXN1-209ENST00000508290 BZW2Q9Y6E2 419 aaKnown RBP20.49■□□□□ 0.87
SFXN1-209ENST00000508290 TARSL2A2RTX5 802 aaKnown RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 GZMAP12544 262 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 BCKDHBP21953 392 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 COPAP53621 1224 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 RPL6Q02878 288 aaKnown RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 PUM1Q14671 1186 aaKnown RBP eCLIP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 HNRNPA1L2Q32P51 320 aaKnown RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 LYSMD4Q5XG99 296 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 DNAJC24Q6P3W2 148 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 SETD3Q86TU7 594 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 RXFP2Q8WXD0 754 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 CENPIQ92674 756 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 SYN2Q92777 582 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 FOXJ1Q92949 421 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 SYT11Q9BT88 431 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 SIK2Q9H0K1 926 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 PCED1AQ9H1Q7 454 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 MBD1Q9UIS9 605 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 CDV3Q9UKY7 258 aaKnown RBP20.48■□□□□ 0.87
SFXN1-209ENST00000508290 ITIH6Q6UXX5 1313 aa20.48■□□□□ 0.87
SFXN1-209ENST00000508290 CFAP54Q96N23 3096 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 PLXND1Q9Y4D7 1925 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 EML5Q05BV3 1969 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 IGLV3-10A0A075B6K4 115 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 DRGXA6NNA5 263 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 RNASEH1O60930 286 aaKnown RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 NDUFS2O75306 463 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 TFE3P19532 575 aaPredicted RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 CD6P30203 668 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 DHPSP49366 369 aaPredicted RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 NRG1Q02297 640 aaPredicted RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 CCDC14Q49A88 953 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 CXorf57Q6NSI4 855 aaKnown RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 TRNP1Q6NT89 227 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 SYT12Q8IV01 421 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 EMC1Q8N766 993 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 IGSF8Q969P0 613 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 TRIM11Q96F44 468 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 ADAM33Q9BZ11 813 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 DLL3Q9NYJ7 618 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 PPARGC1AQ9UBK2 798 aaKnown RBP20.47■□□□□ 0.87
SFXN1-209ENST00000508290 CYP8B1Q9UNU6 501 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 ERVW-1Q9UQF0 538 aa20.47■□□□□ 0.87
SFXN1-209ENST00000508290 EDDM13A0A1B0GTR0 161 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 GPD1P21695 349 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 PBX1P40424 430 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 LIMK1P53667 647 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 AIF1P55008 147 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 ATP11AP98196 1134 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 KLHL30Q0D2K2 578 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 TTC31Q49AM3 519 aaPredicted RBP20.46■□□□□ 0.87
SFXN1-209ENST00000508290 SYCP2LQ5T4T6 812 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 C6orf118Q5T5N4 469 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 PEAR1Q5VY43 1037 aaPredicted RBP20.46■□□□□ 0.87
SFXN1-209ENST00000508290 ZNF783Q6ZMS7 281 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 VPS36Q86VN1 386 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 FAM131BQ86XD5 332 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 ZNF683Q8IZ20 524 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 MCOLN2Q8IZK6 566 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 CADM4Q8NFZ8 388 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 CEP76Q8TAP6 659 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 NTAN1Q96AB6 310 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 MRGPRX3Q96LB0 322 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 C2orf49Q9BVC5 232 aaPredicted RBP20.46■□□□□ 0.87
SFXN1-209ENST00000508290 PRSS16Q9NQE7 514 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 PARVAQ9NVD7 372 aa20.46■□□□□ 0.87
SFXN1-209ENST00000508290 EVLQ9UI08 416 aaPredicted RBP20.46■□□□□ 0.87
SFXN1-209ENST00000508290 MUC22E2RYF6 1773 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms