RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TTC39BQ5VTQ0 682 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 DAB2IPQ5VWQ8 1189 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 FBXL22Q6P050 247 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 APTXQ7Z2E3 356 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 BNIPLQ7Z465 357 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 XYLT1Q86Y38 959 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 APCDD1Q8J025 514 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 CCAR2Q8N163 923 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 C1orf216Q8TAB5 229 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ALG14Q96F25 216 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 NUP58Q9BVL2 599 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 GPR174Q9BXC1 333 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 PCED1AQ9H1Q7 454 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 RSPH9Q9H1X1 276 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 MTG2Q9H4K7 406 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SYNCQ9H7C4 482 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 PIGVQ9NUD9 493 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ARHGEF38Q9NXL2 777 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 KIAA1522Q9P206 1035 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SUN2Q9UH99 717 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 ERVW-1Q9UQF0 538 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 HS3ST4Q9Y661 456 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 EPG5Q9HCE0 2579 aa9.37□□□□□ -0.91
PDLIM5-209ENST00000506632 CEP295Q9C0D2 2601 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 LGALS16A8MUM7 142 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 C10orf142B7Z368 130 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 H0Y626 953 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 M0QYT0 321 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 PAGE1O75459 146 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ADCY5O95622 1261 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CYP1A1P04798 512 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CFIP05156 583 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ACADMP11310 421 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CHRNB2P17787 502 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CSRP1P21291 193 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 PMLP29590 882 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 SOX5P35711 763 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FLT3P36888 993 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CTSOP43234 321 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 IRAK1P51617 712 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 POLR2FP61218 127 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FMO1Q01740 532 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CENPCQ03188 943 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 GFPT1Q06210 699 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 NME3Q13232 169 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 AUHQ13825 339 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 WDR45BQ5MNZ6 344 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 BRMS1LQ5PSV4 323 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 RABGAP1LQ5R372 815 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FKBP15Q5T1M5 1219 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CCDC183Q5T5S1 534 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 C9orf64Q5T6V5 341 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 N4BP2L1Q5TBK1 243 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF776Q68DI1 518 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CXorf57Q6NSI4 855 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 TRNP1Q6NT89 227 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ARCQ7LC44 396 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 C14orf80Q86SX3 495 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ERICH1Q86X53 443 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CIR1Q86X95 450 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF677Q86XU0 584 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CACUL1Q86Y37 369 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 CCDC117Q8IWD4 279 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC20A1Q8WUM9 679 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 IGSF8Q969P0 613 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ERGIC2Q96RQ1 377 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 PDCL3Q9H2J4 239 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ANLNQ9NQW6 1124 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FAM207AQ9NSI2 230 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 SUSD2Q9UGT4 822 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 STAP1Q9ULZ2 295 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 OR51B4Q9Y5P0 310 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 ADAMTS9Q9P2N4 1935 aa9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 NYNRINQ9P2P1 1898 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-209ENST00000506632 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 A0A1B0GTW7 788 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TTC34A8MYJ7 566 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SIN3BO75182 1162 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 GJB3O75712 270 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 GFPT2O94808 682 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 MOCS3O95396 460 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms