RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 DCLK3Q9C098 648 aa14.33□□□□□ -0.11
SERF1B-204ENST00000506542 GDF3Q9NR23 364 aa14.33□□□□□ -0.11
SERF1B-204ENST00000506542 COMMD8Q9NX08 183 aa14.33□□□□□ -0.11
SERF1B-204ENST00000506542 R3HDM2Q9Y2K5 976 aaKnown RBP14.33□□□□□ -0.11
SERF1B-204ENST00000506542 FAM187AA6NFU0 413 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 SOBPA7XYQ1 873 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ZNF487B1APH4 448 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 BHMG1C9JSJ3 638 aaPredicted RBP14.33□□□□□ -0.12
SERF1B-204ENST00000506542 H0Y858 1186 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 PTGIRP43119 386 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.12
SERF1B-204ENST00000506542 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 DEUP1Q05D60 604 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 MESP2Q0VG99 397 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 EFEMP1Q12805 493 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 TCF15Q12870 199 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 KRT81Q14533 505 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 DPYSL2Q16555 572 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 CCNG2Q16589 344 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ITPRIPL2Q3MIP1 535 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ZC3H12AQ5D1E8 599 aaKnown RBP14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ZNF852Q6ZMS4 543 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 BBS12Q6ZW61 710 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 PSTKQ8IV42 348 aaKnown RBP14.33□□□□□ -0.12
SERF1B-204ENST00000506542 SFTPA1Q8IWL2 248 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 BBS7Q8IWZ6 715 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 CCDC185Q8N715 623 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ATG4AQ8WYN0 398 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 SLCO2A1Q92959 643 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 P2RY11Q96G91 374 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
SERF1B-204ENST00000506542 CALN1Q9BXU9 219 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 PCDH18Q9HCL0 1135 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 TRPV5Q9NQA5 729 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 PIGVQ9NUD9 493 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 FAM86C1Q9NVL1 165 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ZMYM5Q9UJ78 669 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 AP4E1Q9UPM8 1137 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 HCN4Q9Y3Q4 1203 aa14.33□□□□□ -0.12
SERF1B-204ENST00000506542 ZSCAN5CA6NGD5 496 aaPredicted RBP14.32□□□□□ -0.12
SERF1B-204ENST00000506542 GREM1O60565 184 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 ERLIN1O75477 346 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 F9P00740 461 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 IFNAR2P48551 515 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 AIF1P55008 147 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 NME3Q13232 169 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 CA9Q16790 459 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 DRICH1Q6PGQ1 229 aaPredicted RBP14.32□□□□□ -0.12
SERF1B-204ENST00000506542 CCNI2Q6ZMN8 369 aaPredicted RBP14.32□□□□□ -0.12
SERF1B-204ENST00000506542 Q6ZS52 159 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 JAMLQ86YT9 394 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 HNRNPLLQ8WVV9 542 aaKnown RBP14.32□□□□□ -0.12
SERF1B-204ENST00000506542 SHDQ96IW2 340 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 PHOX2BQ99453 314 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 EPB41L5Q9HCM4 733 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 ABCC13Q9NSE7 274 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 POLR3BQ9NW08 1133 aaPredicted RBP14.32□□□□□ -0.12
SERF1B-204ENST00000506542 C2orf42Q9NWW7 574 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
SERF1B-204ENST00000506542 SYNJ2BP-COX16A0A087WUM0 186 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 MSI1O43347 362 aaKnown RBP14.31□□□□□ -0.12
SERF1B-204ENST00000506542 CST8O60676 142 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 IGLV3-25P01717 112 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 CYP17A1P05093 508 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 L1CAMP32004 1257 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 GJA4P35212 333 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
SERF1B-204ENST00000506542 TUBP50607 506 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 MMRN1Q13201 1228 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 SNX1Q13596 522 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 GAB4Q2WGN9 574 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 BTBD8Q5XKL5 378 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 C12orf40Q86WS4 652 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 RFX6Q8HWS3 928 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 SEC14L1Q92503 715 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 NTAN1Q96AB6 310 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 FAF2Q96CS3 445 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 ZNF670Q9BS34 389 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 RAB17Q9H0T7 212 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
SERF1B-204ENST00000506542 FAM204AQ9H8W3 233 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 COX16Q9P0S2 106 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 SFMBT1Q9UHJ3 866 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 FZD10Q9ULW2 581 aa14.31□□□□□ -0.12
SERF1B-204ENST00000506542 ESYT3A0FGR9 886 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 KLKB1P03952 638 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 IL4RP24394 825 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 KCNJ1P48048 391 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 SCAPQ12770 1279 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 TFDP2Q14188 446 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 GAS6Q14393 721 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 PPP6R3Q5H9R7 873 aaPredicted RBP14.3□□□□□ -0.12
SERF1B-204ENST00000506542 PKN3Q6P5Z2 889 aa14.3□□□□□ -0.12
SERF1B-204ENST00000506542 TAC4Q86UU9 113 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms