RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 C16orf71Q8IYS4 520 aaPredicted RBP6.58□□□□□ -1.36
HERC4-213ENST00000506515 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 NAXEQ8NCW5 288 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 KCNJ9Q92806 393 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 SARAFQ96BY9 339 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 HIC2Q96JB3 615 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 HTATIP2Q9BUP3 242 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 UBA5Q9GZZ9 404 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 NUAK2Q9H093 628 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 WASH6PQ9NQA3 447 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 ARL8BQ9NVJ2 186 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 TMEM160Q9NX00 188 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 PI4KBQ9UBF8 816 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 DMRT1Q9Y5R6 373 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 ATP10AO60312 1499 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 POC1B-GALNT4F8VUJ3 575 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 UBE2Q2LH0YL09 131 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 KLK10O43240 276 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 ALDOCP09972 364 aaKnown RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 LYL1P12980 280 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 PNPLA4P41247 253 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 TUBP50607 506 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 G3BP1Q13283 466 aaKnown RBP eCLIP6.57□□□□□ -1.36
HERC4-213ENST00000506515 PFKFB3Q16875 520 aaPredicted RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 TMEM119Q4V9L6 283 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 ATG16L1Q676U5 607 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 TMEM88Q6PEY1 159 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 BBS12Q6ZW61 710 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 GALNT4Q8N4A0 578 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 PNLDC1Q8NA58 520 aaKnown RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 TEX19Q8NA77 164 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 HTRA1Q92743 480 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 SEC62Q99442 399 aaKnown RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 TRIM2Q9C040 744 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 OSBPL5Q9H0X9 879 aaPredicted RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 PCED1AQ9H1Q7 454 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 SYNPO2LQ9H987 977 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 SLC13A4Q9UKG4 626 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 INSL6Q9Y581 213 aa6.57□□□□□ -1.36
HERC4-213ENST00000506515 SIRT4Q9Y6E7 314 aaPredicted RBP6.57□□□□□ -1.36
HERC4-213ENST00000506515 RIMS1Q86UR5 1692 aaKnown RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 NHLRC4P0CG21 123 aaPredicted RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 IGFBP2P18065 325 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 MAPK7Q13164 816 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 TBX2Q13207 712 aaPredicted RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 INTS11Q5TA45 600 aaKnown RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 SUMO4Q6EEV6 95 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 CHSY1Q86X52 802 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 ADGRF3Q8IZF5 1079 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 USP38Q8NB14 1042 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 ADPRHL1Q8NDY3 354 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 CELF1Q92879 486 aaKnown RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 ZNF845Q96IR2 970 aaPredicted RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 MPP4Q96JB8 637 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 RITA1Q96K30 269 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 PPM1MQ96MI6 270 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 SENP7Q9BQF6 1050 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 ABHD14AQ9BUJ0 271 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 GPR63Q9BZJ6 419 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 MAF1Q9H063 256 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 SFXN1Q9H9B4 322 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 SEMA4GQ9NTN9 838 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 MTMR4Q9NYA4 1195 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 ARPP21Q9UBL0 812 aaPredicted RBP6.56□□□□□ -1.36
HERC4-213ENST00000506515 SPATA31D1Q6ZQQ2 1576 aa6.56□□□□□ -1.36
HERC4-213ENST00000506515 SAC3D1A6NKF1 404 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 ANP32CO43423 234 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 TSPAN3O60637 253 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 CNTN5O94779 1100 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 CLK3P49761 638 aaKnown RBP6.55□□□□□ -1.36
HERC4-213ENST00000506515 ZNF84P51523 738 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 B4GALNT1Q00973 533 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 GPR162Q16538 588 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 CERKLQ49MI3 558 aaPredicted RBP6.55□□□□□ -1.36
HERC4-213ENST00000506515 RUNDC3AQ59EK9 446 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 CBWD5Q5RIA9 395 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 PRAMEF17Q5VTA0 474 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 PCSK4Q6UW60 755 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.55□□□□□ -1.36
HERC4-213ENST00000506515 SLC16A11Q8NCK7 471 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 PPP1R10Q96QC0 940 aaKnown RBP6.55□□□□□ -1.36
HERC4-213ENST00000506515 HDHD5Q9BXW7 423 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 TLR8Q9NR97 1041 aaKnown RBP6.55□□□□□ -1.36
HERC4-213ENST00000506515 ZNF69Q9UC07 566 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 PNMA2Q9UL42 364 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 TRAPPC8Q9Y2L5 1435 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 ZFYVE16Q7Z3T8 1539 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
HERC4-213ENST00000506515 C9orf84Q5VXU9 1444 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 CNTLNQ9NXG0 1405 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 A6NLC8 198 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 TMEM232C9JQI7 657 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 J3KRW8 73 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 CYR61O00622 381 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 PEX12O00623 359 aa6.54□□□□□ -1.36
HERC4-213ENST00000506515 EPB41L2O43491 1005 aaKnown RBP6.54□□□□□ -1.36
HERC4-213ENST00000506515 ENO1P06733 434 aaKnown RBP6.54□□□□□ -1.36
HERC4-213ENST00000506515 CHRM5P08912 532 aaPredicted RBP6.54□□□□□ -1.36
HERC4-213ENST00000506515 LIFRP42702 1097 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms