RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 GRM8O00222 908 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 FAM155BO75949 473 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 KRT38O76015 456 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 CD63P08962 238 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 PRF1P14222 555 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 PRPH2P23942 346 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 SLC12A2P55011 1212 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ZBTB16Q05516 673 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 DCTN1Q14203 1278 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 RBMS2Q15434 407 aaKnown RBP4.34□□□□□ -1.71
CHD1-203ENST00000505657 MIDNQ504T8 468 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 TMEM88Q6PEY1 159 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 UBE2Q1Q7Z7E8 422 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 MOGAT3Q86VF5 341 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHD1-203ENST00000505657 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
CHD1-203ENST00000505657 NANOGP1Q8N7R0 232 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 NRACQ8N912 160 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ADPRHL1Q8NDY3 354 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 RUBCNQ92622 972 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 KAT2BQ92831 832 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 EME1Q96AY2 570 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ARRDC3Q96B67 414 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 TBC1D20Q96BZ9 403 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
CHD1-203ENST00000505657 MYLK2Q9H1R3 596 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 IL21RQ9HBE5 538 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 PDE11AQ9HCR9 933 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 G6PC2Q9NQR9 355 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ITM2CQ9NQX7 267 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ELOVL5Q9NYP7 299 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 HEY2Q9UBP5 337 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 AFG3L2Q9Y4W6 797 aa4.34□□□□□ -1.71
CHD1-203ENST00000505657 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.34□□□□□ -1.71
CHD1-203ENST00000505657 ZMYM2Q9UBW7 1377 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 TRBV5-3A0A0A0MS03 114 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PPEF2O14830 753 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 MOSPD3O75425 235 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 CSF1P09603 554 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ACP5P13686 325 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ADD2P35612 726 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ADPRHP54922 357 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 CDK18Q07002 472 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 MTX1Q13505 466 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 TBRG1Q3YBR2 411 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 LDHAL6AQ6ZMR3 332 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ANKRD13BQ86YJ7 626 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ZNF548Q8NEK5 533 aaPredicted RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 FAM110DQ8TAY7 271 aaPredicted RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 BCAS4Q8TDM0 211 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PIGOQ8TEQ8 1089 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 CCT6BQ92526 530 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ZNF48Q96MX3 618 aaPredicted RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 NPAS1Q99742 590 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PAGR1Q9BTK6 254 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 FRMD8Q9BZ67 464 aaPredicted RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 AAMDCQ9H7C9 122 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 RMI1Q9H9A7 625 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PLEKHA2Q9HB19 425 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 ERVK-5Q9HDB9 667 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PAPOLBQ9NRJ5 636 aaKnown RBP4.33□□□□□ -1.72
CHD1-203ENST00000505657 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 UTS2RQ9UKP6 389 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 PKP3Q9Y446 797 aa4.33□□□□□ -1.72
CHD1-203ENST00000505657 MCIDASD6RGH6 385 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 F8W810 466 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 FGBP02675 491 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 DHRS4L1P0CG22 281 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD1-203ENST00000505657 ASPHD1Q5U4P2 390 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 TTLL5Q6EMB2 1281 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 RNF144BQ7Z419 303 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 DDIASQ8IXT1 998 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 TMEM217Q8N7C4 229 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 OR6Y1Q8NGX8 325 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 THAP4Q8WY91 577 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 SMG7Q92540 1137 aaKnown RBP4.32□□□□□ -1.72
CHD1-203ENST00000505657 MSI2Q96DH6 328 aaKnown RBP4.32□□□□□ -1.72
CHD1-203ENST00000505657 FAM167BQ9BTA0 163 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 TWSG1Q9GZX9 223 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 CLPBQ9H078 707 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 SAYSD1Q9NPB0 183 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 SLC22A11Q9NSA0 550 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 MSRB1Q9NZV6 116 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 GPR52Q9Y2T5 361 aa4.32□□□□□ -1.72
CHD1-203ENST00000505657 ZNF521Q96K83 1311 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 LY6G6EA0A0G2JKS1 128 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 KIR2DS5A0A0G2JLQ3 304 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 A6NNC1 897 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 KIR2DS3K7RE56 304 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 TLX3O43711 291 aaPredicted RBP4.31□□□□□ -1.72
CHD1-203ENST00000505657 FGF2P09038 288 aa4.31□□□□□ -1.72
CHD1-203ENST00000505657 CHN1P15882 459 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms