RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 SERPINI1Q99574 410 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HIST1H2AGP0C0S8 130 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 ITGB6P18564 788 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HIST1H2ADP20671 130 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 GP5P40197 560 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 FAM187BQ17R55 369 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 N4BP2L1Q5TBK1 243 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 DCAF12L1Q5VU92 463 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PRSS55Q6UWB4 352 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 NUDT18Q6ZVK8 323 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 RBM23Q86U06 439 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PSTKQ8IV42 348 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HIST1H2AHQ96KK5 128 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HIST1H2AJQ99878 128 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 H2AFJQ9BTM1 129 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 SDK1Q7Z5N4 2213 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 GON4LQ3T8J9 2241 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 PHGDHO43175 533 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MFSD11O43934 449 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ACRP10323 421 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 IL1R2P27930 398 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 CTNNB1P35222 781 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 PGM1P36871 562 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 FASTKD3Q14CZ7 662 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 FUT10Q6P4F1 479 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 KCTD15Q96SI1 283 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 DNMT3LQ9UJW3 386 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MYH10P35580 1976 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 DNAJC25-GNG10A0A024R161 153 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 TRIM16O95361 564 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 CYP3A5P20815 502 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 TARSP26639 723 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 SERPINB8P50452 374 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ITGA9Q13797 1035 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 NOMO1Q15155 1222 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 SYPL2Q5VXT5 272 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ECHDC2Q86YB7 292 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MFN1Q8IWA4 741 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 LRRC43Q8N309 656 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 FIBCD1Q8N539 461 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 EIF1ADQ8N9N8 165 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 UBA2Q9UBT2 640 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 CRYL1Q9Y2S2 319 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 TIAM2Q8IVF5 1701 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 AIM2O14862 343 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 GLP2RO95838 553 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-207ENST00000504761 TNFRSF8P28908 595 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MAP7Q14244 749 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ZNF697Q5TEC3 545 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 NLRP9Q7RTR0 991 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 PHF21BQ96EK2 531 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 MAGEB18Q96M61 343 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 ZBTB18Q99592 522 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 IL1RAPL1Q9NZN1 696 aa14.4□□□□□ -0.1
TCOF1-207ENST00000504761 B2RBV5 119 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 GSTA4O15217 222 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CHADO15335 359 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 PGAM1P18669 254 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 HMOX2P30519 316 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 EFTUD2Q15029 972 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■■■■■ 57.6
TCOF1-207ENST00000504761 SPDYAQ5MJ70 313 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 SZRD1Q7Z422 152 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 TBL1YQ9BQ87 522 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 UBE2OQ9C0C9 1292 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 ZYG11BQ9C0D3 744 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 TRMT6Q9UJA5 497 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 A0A096LPK6 155 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 IGKV6D-21A0A0A0MT36 114 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 PLK1P53350 603 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 OGDHQ02218 1023 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 SYTL3Q4VX76 610 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CDK5RAP1Q96SZ6 601 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 DRC3Q9H069 523 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 EML4Q9HC35 981 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 DCDC2Q9UHG0 476 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 ERI2A8K979 691 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 GNGT2O14610 69 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CSH1P0DML2 217 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CSH2P0DML3 217 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 CPA3P15088 417 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 RPA3P35244 121 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 LAYNQ6UX15 382 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 TMEM40Q8WWA1 233 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms