RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 OSBPL2Q9H1P3 480 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 KDM4CQ9H3R0 1056 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 STIM2Q9P246 746 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 ERVW-1Q9UQF0 538 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 DOPEY2Q9Y3R5 2298 aa16.41■□□□□ 0.22
PDLIM7-210ENST00000503827 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 TTC34A8MYJ7 566 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 IKBKBO14920 756 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 IRAK2O43187 625 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 IL1BP01584 269 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 MAT2AP31153 395 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 SKOR1P84550 965 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 RABEP1Q15276 862 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 ISXQ2M1V0 245 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 ZSCAN23Q3MJ62 389 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 RFWD3Q6PCD5 774 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 XKR5Q6UX68 686 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 UNC13DQ70J99 1090 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 EXD3Q8N9H8 876 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 GRAMD1AQ96CP6 724 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 LMLNQ96KR4 655 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 ULBP1Q9BZM6 244 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 UCKL1Q9NWZ5 548 aa16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 INTS6Q9UL03 887 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-210ENST00000503827 TYW5A2RUC4 315 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 PRAMEF26H0Y7S4 382 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC11A2P49281 568 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 ARL13BQ3SXY8 428 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 SETMARQ53H47 684 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 STK40Q8N2I9 435 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 NDRG1Q92597 394 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 EDEM1Q92611 657 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 APOLD1Q96LR9 279 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 C7orf25Q9BPX7 421 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 ARHGAP9Q9BRR9 750 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 USP29Q9HBJ7 922 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 KLHL11Q9NVR0 708 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 TJP2Q9UDY2 1190 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 MORC2Q9Y6X9 1032 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 ITIH6Q6UXX5 1313 aa16.39■□□□□ 0.21
PDLIM7-210ENST00000503827 COL27A1Q8IZC6 1860 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 GOLGA6L7A0A1B0GV03 622 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC7A4O43246 635 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 MSI1O43347 362 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 LZTS3O60299 673 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 MOCS3O95396 460 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 DRD3P35462 400 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 E2F4Q16254 413 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 RNF219Q5W0B1 726 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 BSPRYQ5W0U4 402 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 BHLHA9Q7RTU4 235 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 TRIM69Q86WT6 500 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC9A9Q8IVB4 645 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 CARNMT1Q8N4J0 409 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 DHX58Q96C10 678 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 CCNL2Q96S94 520 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 ABCC13Q9NSE7 274 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 DMAC2Q9NW81 257 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 NLGN3Q9NZ94 848 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 PCDHGA8Q9Y5G5 932 aa16.38■□□□□ 0.21
PDLIM7-210ENST00000503827 NEMP2A6NFY4 417 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 PLRG1O43660 514 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 ACSL4O60488 711 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 PIAS2O75928 621 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 THEGLP0DJG4 465 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 MYF5P13349 255 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 SLC6A4P31645 630 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 NNMTP40261 264 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 CTSOP43234 321 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 KCNMA1Q12791 1236 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 CLN3Q13286 438 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 CDH18Q13634 790 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 POM121L1PQ3SYA9 428 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 FAM133BQ5BKY9 247 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 PITRM1Q5JRX3 1037 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 NUGGCQ68CJ6 796 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 FAM173BQ6P4H8 233 aa16.37■□□□□ 0.21
PDLIM7-210ENST00000503827 ARL14Q8N4G2 192 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms