RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 CXorf57Q6NSI4 855 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 CCDC185Q8N715 623 aa18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 SORCS1Q8WY21 1168 aa18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 THAP2Q9H0W7 228 aa18.79■□□□□ 0.6
PDLIM7-209ENST00000503346 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 AXIN1O15169 862 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 ALDH1A2O94788 518 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 ATP5BP06576 529 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 DLDP09622 509 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 POLR2EP19388 210 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 PSMA2P25787 234 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 AIF1P55008 147 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 GFPT1Q06210 699 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 ZNF252P-AS1Q0IIN9 211 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 ZNF177Q13360 481 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 PTPRNQ16849 979 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 ALFQ53S48 1182 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 PITRM1Q5JRX3 1037 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 CHP1Q99653 195 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 TRIM7Q9C029 511 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 DEF6Q9H4E7 631 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 MYO1AQ9UBC5 1043 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 PPARGC1AQ9UBK2 798 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 PLA2G4CQ9UP65 541 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 TBC1D30Q9Y2I9 924 aa18.78■□□□□ 0.6
PDLIM7-209ENST00000503346 WASH3PC4AMC7 463 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 HRO43593 1189 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 CNTN5O94779 1100 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 MOCS3O95396 460 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 ASLP04424 464 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 CYP1A2P05177 515 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 CSKP41240 450 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 PLK1P53350 603 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 PLEKHG6Q3KR16 790 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 MANEALQ5VSG8 457 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 ANO7Q6IWH7 933 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 SLFN11Q7Z7L1 901 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 TC2NQ8N9U0 490 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 MDGA1Q8NFP4 955 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 CYB5D2Q8WUJ1 264 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 NKD2Q969F2 451 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 PPP1R9BQ96SB3 815 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 TMEM245Q9H330 911 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 OR12D3Q9UGF7 316 aa18.77■□□□□ 0.6
PDLIM7-209ENST00000503346 TCRBV21S2A2A0A5A6 115 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 AKR1B10O60218 316 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 SRGAP2O75044 1071 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 GALCP54803 685 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 KIAA1211LQ6NV74 962 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 SCYL2Q6P3W7 929 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 SERPINA13PQ6UXR4 307 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 APCDD1Q8J025 514 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 KDM1BQ8NB78 822 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 OR52K2Q8NGK3 314 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 ALG14Q96F25 216 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 RETREG1Q9H6L5 497 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 MPP6Q9NZW5 540 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 ZNF212Q9UDV6 495 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 FZD10Q9ULW2 581 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 RAD54BQ9Y620 910 aa18.76■□□□□ 0.59
PDLIM7-209ENST00000503346 ATG2BQ96BY7 2078 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 FAM72CH0Y354 149 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 PRKCHP24723 683 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 MZF1P28698 734 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 STARD3Q14849 445 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 ACAP1Q15027 740 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 FNDC3BQ53EP0 1204 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 EFHC2Q5JST6 749 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 FAM72AQ5TYM5 149 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 FAM72DQ6L9T8 149 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 SETD3Q86TU7 594 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 FAM72BQ86X60 149 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 ARFGAP1Q8N6T3 406 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 ARHGEF26Q96DR7 871 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 MYO19Q96H55 970 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 MRGPRX3Q96LB0 322 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 NCAPGQ9BPX3 1015 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 NEU3Q9UQ49 428 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 OR51B4Q9Y5P0 310 aa18.75■□□□□ 0.59
PDLIM7-209ENST00000503346 RNF8O76064 485 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 LRIG2O94898 1065 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 LMNAP02545 664 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 SRPRAP08240 638 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 GABRG2P18507 467 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 L1CAMP32004 1257 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 ECT2LQ008S8 904 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 SULT2A1Q06520 285 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 SRSF5Q13243 272 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 C6orf118Q5T5N4 469 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 SUMF1Q8NBK3 374 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 HMGB4Q8WW32 186 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 FEM1AQ9BSK4 669 aa18.74■□□□□ 0.59
PDLIM7-209ENST00000503346 NUP85Q9BW27 656 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms