RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 KIAA1522Q9P206 1035 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SUSD2Q9UGT4 822 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SNX10Q9Y5X0 201 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 KMT2BQ9UMN6 2715 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 USP24Q9UPU5 2620 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 A0A1B0GVT2 93 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 TYW5A2RUC4 315 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 F5H5T6 163 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 I6L893 689 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 PES1O00541 588 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 SEMA4FO95754 770 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 PDGFRAP16234 1089 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 CSNK1EP49674 416 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 RNASE9P60153 205 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 SIM1P81133 766 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 C2CD6Q53TS8 623 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 TAF3Q5VWG9 929 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 ZNF776Q68DI1 518 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 CXorf57Q6NSI4 855 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 LAYNQ6UX15 382 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 MMAAQ8IVH4 418 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 CCAR2Q8N163 923 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 RNF34Q969K3 372 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 FAM129BQ96TA1 746 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 PABPC3Q9H361 631 aaKnown RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.78■□□□□ 0.28
SCLT1-204ENST00000503215 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
SCLT1-204ENST00000503215 M0QYT0 321 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 MID1O15344 667 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 DNTTP04053 509 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ASLP04424 464 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 CYP11B1P15538 503 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 CCR1P32246 355 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 KLK7P49862 253 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ECT2LQ008S8 904 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ST3GAL2Q16842 350 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
SCLT1-204ENST00000503215 STK40Q8N2I9 435 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ZNF557Q8N988 423 aaPredicted RBP16.77■□□□□ 0.28
SCLT1-204ENST00000503215 GPT2Q8TD30 523 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 BIRC7Q96CA5 298 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 ORAI3Q9BRQ5 295 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 BTBD1Q9H0C5 482 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 SLC32A1Q9H598 525 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 SYNCQ9H7C4 482 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 TMPRSS4Q9NRS4 437 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 PIGVQ9NUD9 493 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 FNDC3AQ9Y2H6 1198 aaKnown RBP16.77■□□□□ 0.28
SCLT1-204ENST00000503215 HS3ST4Q9Y661 456 aa16.77■□□□□ 0.28
SCLT1-204ENST00000503215 SPEGQ15772 3267 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 C1QTNF9BB2RNN3 333 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 KCNK3O14649 394 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 HYAL3O43820 417 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-204ENST00000503215 PAGE1O75459 146 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 DAB1O75553 588 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 FSBPO95073 299 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ADCY5O95622 1261 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 C1QTNF9P0C862 333 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 UCHL3P15374 230 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ABCB4P21439 1286 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ZBTB16Q05516 673 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ARID5BQ14865 1188 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 TRNP1Q6NT89 227 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 CCDC117Q8IWD4 279 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-204ENST00000503215 GANCQ8TET4 914 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 PTPRN2Q92932 1015 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 ALG14Q96F25 216 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 NPY6RQ99463 290 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 SCNM1Q9BWG6 230 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 SIK2Q9H0K1 926 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 NEUROG2Q9H2A3 272 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 FBRSQ9HAH7 460 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 CEP83Q9Y592 693 aa16.77■□□□□ 0.27
SCLT1-204ENST00000503215 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 A0A1W2PP55 124 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 FAM47DPA6NHR8 397 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 PLK4O00444 970 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 IGHV4-34P06331 123 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 SRPRAP08240 638 aaKnown RBP16.76■□□□□ 0.27
SCLT1-204ENST00000503215 SLC2A3P11169 496 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 CDH5P33151 784 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-204ENST00000503215 NOS2P35228 1153 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 MATKP42679 507 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 METAP1P53582 386 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 CST6Q15828 149 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 KIF19Q2TAC6 998 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 HLA-BQ31612 363 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms