RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 CPXM2Q8N436 756 aa15.66■□□□□ 0.1
MBD4-204ENST00000503197 CELF5Q8N6W0 485 aaKnown RBP15.66■□□□□ 0.1
MBD4-204ENST00000503197 LRRN4Q8WUT4 740 aa15.66■□□□□ 0.1
MBD4-204ENST00000503197 RIPOR3Q96MK2 946 aa15.66■□□□□ 0.1
MBD4-204ENST00000503197 DDX50Q9BQ39 737 aaKnown RBP15.66■□□□□ 0.1
MBD4-204ENST00000503197 LRRC1Q9BTT6 524 aa15.66■□□□□ 0.1
MBD4-204ENST00000503197 FRMD8P1Q9BZ68 369 aaPredicted RBP15.66■□□□□ 0.1
MBD4-204ENST00000503197 NOL6Q9H6R4 1146 aaKnown RBP15.66■□□□□ 0.1
MBD4-204ENST00000503197 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.66■□□□□ 0.1
MBD4-204ENST00000503197 V9GYY5 206 aaPredicted RBP15.66■□□□□ 0.1
MBD4-204ENST00000503197 NUP205Q92621 2012 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 H3BQ06 376 aaPredicted RBP15.65■□□□□ 0.1
MBD4-204ENST00000503197 FCARP24071 287 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 MTHFRP42898 656 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 EIF3EP60228 445 aaKnown RBP15.65■□□□□ 0.1
MBD4-204ENST00000503197 CCDC85BQ15834 202 aaPredicted RBP15.65■□□□□ 0.1
MBD4-204ENST00000503197 TEX35Q5T0J7 233 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 AFMIDQ63HM1 303 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 ZC3H18Q86VM9 953 aaKnown RBP15.65■□□□□ 0.1
MBD4-204ENST00000503197 ARHGAP12Q8IWW6 846 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 SUSD6Q92537 303 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 TRPV4Q9HBA0 871 aa15.65■□□□□ 0.1
MBD4-204ENST00000503197 RAD51CO43502 376 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 RBP3P10745 1247 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 PTGIRP43119 386 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 NAA30Q147X3 362 aaPredicted RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 RABGAP1LQ5R372 815 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 ST13P5Q8NFI4 369 aaPredicted RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 CELF6Q96J87 481 aaKnown RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 LINC00597Q9H2U6 94 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 CD207Q9UJ71 328 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 MCF2LO15068 1137 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 ITGAVP06756 1048 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 SERPINB6P35237 376 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 CHKAP35790 457 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 ERCC6LQ2NKX8 1250 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 UMODL1-AS1Q8N2C9 162 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 TDRD5Q8NAT2 981 aaKnown RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 SLCO2A1Q92959 643 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 TMEM121Q9BTD3 319 aa15.64■□□□□ 0.09
MBD4-204ENST00000503197 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 USP15Q9Y4E8 981 aaPredicted RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 NYNRINQ9P2P1 1898 aaKnown RBP15.64■□□□□ 0.09
MBD4-204ENST00000503197 TTI1O43156 1089 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 CDH4P55283 916 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 DR1Q01658 176 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 GALNT2Q10471 571 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 XRCC4Q13426 336 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 C8orf74Q6P047 294 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 OR52K2Q8NGK3 314 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 ATL2Q8NHH9 583 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 TMA16Q96EY4 203 aaKnown RBP15.63■□□□□ 0.09
MBD4-204ENST00000503197 LGMNQ99538 433 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 SLC39A8Q9C0K1 460 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 EPC1Q9H2F5 836 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 ZNF148Q9UQR1 794 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 NEU2Q9Y3R4 380 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 WNT6Q9Y6F9 365 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 LAMP2P13473 410 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 GDF10P55107 478 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 SLC7A5Q01650 507 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 FAM182AQ5T1J6 154 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 TTC39BQ5VTQ0 682 aaPredicted RBP15.63■□□□□ 0.09
MBD4-204ENST00000503197 TANGO2Q6ICL3 276 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 CHST9Q7L1S5 443 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 HJURPQ8NCD3 748 aaPredicted RBP15.63■□□□□ 0.09
MBD4-204ENST00000503197 BHMTQ93088 406 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 UBE2ZQ9H832 354 aaPredicted RBP15.63■□□□□ 0.09
MBD4-204ENST00000503197 USP29Q9HBJ7 922 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 DMGDHQ9UI17 866 aaKnown RBP15.63■□□□□ 0.09
MBD4-204ENST00000503197 RAD54BQ9Y620 910 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 CHD5Q8TDI0 1954 aa15.63■□□□□ 0.09
MBD4-204ENST00000503197 KIF26AQ9ULI4 1882 aaPredicted RBP15.62■□□□□ 0.09
MBD4-204ENST00000503197 A0A1B0GVM2 712 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 GRXCR2A6NFK2 248 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 TCAF2A6NFQ2 919 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 H7C0C1 242 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 CTIFO43310 598 aaKnown RBP15.62■□□□□ 0.09
MBD4-204ENST00000503197 TBL1XO60907 577 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 CLDN11O75508 207 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 RHOXF2BP0C7M4 288 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 KCNA5P22460 613 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 OR1E1P30953 314 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 ATP5OP48047 213 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 MAPKAPK2P49137 400 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 DHX34Q14147 1143 aaKnown RBP15.62■□□□□ 0.09
MBD4-204ENST00000503197 PDK1Q15118 436 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 PRKD1Q15139 912 aaPredicted RBP15.62■□□□□ 0.09
MBD4-204ENST00000503197 SLC45A4Q5BKX6 768 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 FYB2Q5VWT5 728 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 RNF43Q68DV7 783 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 TPGS1Q6ZTW0 290 aa15.62■□□□□ 0.09
MBD4-204ENST00000503197 BZW1Q7L1Q6 419 aaKnown RBP15.62■□□□□ 0.09
MBD4-204ENST00000503197 TMEM25Q86YD3 366 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms