RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 PNPLA8Q9NP80 782 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
USP46-204ENST00000503060 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 RGS18Q9NS28 235 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 DDIT4Q9NX09 232 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 SAMD15Q9P1V8 674 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 NR2E3Q9Y5X4 410 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 FAM72CH0Y354 149 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ASMTLO95671 621 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 TYMPP19971 482 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 CA8P35219 290 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 MAGEA3P43357 314 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 IL9RQ01113 521 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 SEMA3BQ13214 749 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 PDK1Q15118 436 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ANKRD20A2Q5SQ80 823 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 FAM72AQ5TYM5 149 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ANKRD20A1Q5TYW2 823 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ANKRD20A3Q5VUR7 823 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 FAM72DQ6L9T8 149 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 TRAF7Q6Q0C0 670 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ZNF534Q76KX8 674 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 RTN4RL1Q86UN2 441 aaPredicted RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 LRRTM3Q86VH5 581 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 FAM72BQ86X60 149 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 LRRC49Q8IUZ0 686 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 EDEM1Q92611 657 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 LRRC39Q96DD0 335 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 SSU72Q9NP77 194 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP46-204ENST00000503060 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 F8W810 466 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 I6L893 689 aaPredicted RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 ZSCAN9O15535 394 aaPredicted RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 TYROBPO43914 113 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 F9P00740 461 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 AMHP03971 560 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 BTF3P20290 206 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 FDFT1P37268 417 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 MAGEA9P43362 315 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 GLUD2P49448 558 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 COPAP53621 1224 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 TSPY1Q01534 308 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 ITIH4Q14624 930 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 MBTPS1Q14703 1052 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 KBTBD12Q3ZCT8 623 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 GLB1LQ6UWU2 654 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 SCML4Q8N228 414 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
USP46-204ENST00000503060 FGFR1OP2Q9NVK5 253 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 UBAP1Q9NZ09 502 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
USP46-204ENST00000503060 PRRT4C9JH25 899 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 RNF103O00237 685 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 EOMESO95936 686 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 ERCC2P18074 760 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CA4P22748 312 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 FOXN2P32314 431 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 HCAR3P49019 387 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CXCR3P49682 368 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 HSD17B7P56937 341 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 TPI1P60174 286 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 AP1B1Q10567 949 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 SPARCL1Q14515 664 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 GRAMD1BQ3KR37 738 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 ARL13BQ3SXY8 428 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 BSPRYQ5W0U4 402 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 DENND5BQ6ZUT9 1274 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 PEX5LQ8IYB4 626 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 ANKS4BQ8N8V4 417 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 RAET1EQ8TD07 263 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 LINC01599Q8WXQ3 324 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 ARMC5Q96C12 935 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 P2RY11Q96G91 374 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 SIGLEC10Q96LC7 697 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 FRMD6Q96NE9 622 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 FERMT1Q9BQL6 677 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 TSEN34Q9BSV6 310 aaKnown RBP11.88□□□□□ -0.51
USP46-204ENST00000503060 COLEC11Q9BWP8 271 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CAPN10Q9HC96 672 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
USP46-204ENST00000503060 SNX3O60493 162 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 B4GALT3O60512 393 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 OPHN1O60890 802 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 CPP00450 1065 aa11.88□□□□□ -0.51
USP46-204ENST00000503060 C1QAP02745 245 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms