RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	ARHGAP12	Q8IWW6	846 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	NPAS3	Q8IXF0	933 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	KLHL7	Q8IXQ5	586 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	CPXM2	Q8N436	756 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	NPW	Q8N729	165 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	KIAA1958	Q8N8K9	716 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	RTL3	Q8N8U3	475 aa	Known RBP	12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	ANKK1	Q8NFD2	765 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	SH3RF2	Q8TEC5	729 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	RUNDC3B	Q96NL0	473 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	FAM118B	Q9BPY3	351 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	LRRC1	Q9BTT6	524 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	RETREG1	Q9H6L5	497 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	TDP1	Q9NUW8	608 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	TMEM248	Q9NWD8	314 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	CFAP97	Q9P2B7	532 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	AMACR	Q9UHK6	382 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	VANGL2	Q9ULK5	521 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	NEU2	Q9Y3R4	380 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	RAD54B	Q9Y620	910 aa		12.51	□□□□□ -0.41
MATR3-231	ENST00000502394	DOCK4	Q8N1I0	1966 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	E2F8	A0AVK6	867 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394		F5H5T6	163 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	SMAP	O00193	183 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	CNTN5	O94779	1100 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ITGAV	P06756	1048 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	FSHR	P23945	695 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	AVPR1A	P37288	418 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	KCNJ1	P48048	391 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	XRCC4	Q13426	336 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	BYSL	Q13895	437 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	DHX34	Q14147	1143 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	NAA30	Q147X3	362 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ERCC6L	Q2NKX8	1250 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ALF	Q53S48	1182 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	C1orf228	Q6PIY5	440 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	CCDC137	Q6PK04	289 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	TMCO3	Q6UWJ1	677 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	LRRC31	Q6UY01	552 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	TP53INP2	Q8IXH6	220 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	LGI2	Q8N0V4	545 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ATL2	Q8NHH9	583 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ING5	Q8WYH8	240 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	P3H4	Q92791	437 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	PABPC5	Q96DU9	382 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	P2RY11	Q96G91	374 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ZYG11B	Q9C0D3	744 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	SMG9	Q9H0W8	520 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	NOL6	Q9H6R4	1146 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	CATSPERB	Q9H7T0	1116 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ANKZF1	Q9H8Y5	726 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	KIF9	Q9HAQ2	790 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	TRPV4	Q9HBA0	871 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	NDFIP2	Q9NV92	336 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	MPP6	Q9NZW5	540 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	STIM2	Q9P246	746 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	LSM7	Q9UK45	103 aa	Known RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	ZNF510	Q9Y2H8	683 aa		12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.5	□□□□□ -0.41
MATR3-231	ENST00000502394	DENND4A	Q7Z401	1863 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	BCLAF3	A2AJT9	711 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	FAM187A	A6NFU0	413 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	MCF2L	O15068	1137 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	DAPK3	O43293	454 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RBP3	P10745	1247 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	SERPINB6	P35237	376 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	SGSH	P51688	502 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	PTPN5	P54829	565 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	EIF3E	P60228	445 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	GALNT2	Q10471	571 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	SNX1	Q13596	522 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	CBX2	Q14781	532 aa	Predicted RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RWDD4	Q6NW29	188 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	C8orf74	Q6P047	294 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RFWD3	Q6PCD5	774 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	CHST9	Q7L1S5	443 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	JAML	Q86YT9	394 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	BBS7	Q8IWZ6	715 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	UMODL1-AS1	Q8N2C9	162 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	LZTR1	Q8N653	840 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	ALLC	Q8N6M5	410 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	SEC14L1	Q92503	715 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	FGF13	Q92913	245 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RSPRY1	Q96DX4	576 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RTP4	Q96DX8	246 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	ASB16	Q96NS5	453 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	RPRD1A	Q96P16	312 aa	Predicted RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	4e-18	■■■■■ 29.1
MATR3-231	ENST00000502394	DDX50	Q9BQ39	737 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	APOL5	Q9BWW9	433 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	USP29	Q9HBJ7	922 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	CLDND1	Q9NY35	253 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	GDE1	Q9NZC3	331 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	1e-323	■■■□□ 17.6
MATR3-231	ENST00000502394	DMGDH	Q9UI17	866 aa	Known RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	SH3BP1	Q9Y3L3	701 aa		12.49	□□□□□ -0.41
MATR3-231	ENST00000502394		V9GYY5	206 aa	Predicted RBP	12.49	□□□□□ -0.41
MATR3-231	ENST00000502394	DOCK8	Q8NF50	2099 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms