RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 ACOX2Q99424 681 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 STK33Q9BYT3 514 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 RAB6BQ9NRW1 208 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 ABCB8Q9NUT2 735 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 ASNSD1Q9NWL6 643 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 TMEM63CQ9P1W3 806 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 PLA2G4CQ9UP65 541 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 STARD13Q9Y3M8 1113 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 PAXBP1Q9Y5B6 917 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 STON1Q9Y6Q2 735 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
CDK11A-222ENST00000498810 TNRC6BQ9UPQ9 1833 aaKnown RBP11.05□□□□□ -0.64
CDK11A-222ENST00000498810 GOLGA6L7A0A1B0GV03 622 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 LGALS16A8MUM7 142 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 GOLGA8SH3BPF8 625 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 GFRA2O00451 464 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 AP5Z1O43299 807 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ZNF217O75362 1048 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 IGLV3-27P01718 113 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ERBB2P04626 1255 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ATP5BP06576 529 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 POLR2EP19388 210 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 CCR1P32246 355 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 STAT1P42224 750 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 KLK7P49862 253 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 SULT1E1P49888 294 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 RPL6Q02878 288 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 KCNMA1Q12791 1236 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 CSRP2Q16527 193 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 PTPN20Q4JDL3 420 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ZC3H12AQ5D1E8 599 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 NAA35Q5VZE5 725 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 LRSAM1Q6UWE0 723 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 BEND5Q7L4P6 421 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ABCA7Q8IZY2 2146 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 ELOVL2Q9NXB9 296 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 CYP8B1Q9UNU6 501 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 PCDHGA5Q9Y5G8 931 aa11.04□□□□□ -0.64
CDK11A-222ENST00000498810 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.04□□□□□ -0.64
CDK11A-222ENST00000498810 MUC22E2RYF6 1773 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 M0QYT0 321 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 TIMM44O43615 452 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 MMEP08473 750 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 CISD3P0C7P0 127 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 HNRNPLP14866 589 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 GABRG2P18507 467 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 TACR2P21452 398 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 BCKDHBP21953 392 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SLC6A4P31645 630 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SOX5P35711 763 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 IL12RB1P42701 662 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 RPL34P49207 117 aaKnown RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SGSHP51688 502 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 CENPCQ03188 943 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 MTA1Q13330 715 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 ZNF234Q14588 700 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 TAF5Q15542 800 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 FAM133BQ5BKY9 247 aaKnown RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PIK3R6Q5UE93 754 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 TTC39BQ5VTQ0 682 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 LYSMD4Q5XG99 296 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PMS2CLQ68D20 193 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 IL31Q6EBC2 164 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 OLFML1Q6UWY5 402 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SLC26A9Q7LBE3 791 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 DGLUCYQ7Z3D6 616 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 NOP9Q86U38 636 aaKnown RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 ZNF677Q86XU0 584 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 NETO1Q8TDF5 533 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 CYB5D2Q8WUJ1 264 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 SORCS1Q8WY21 1168 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PIGKQ92643 395 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PRCCQ92733 491 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 AZIN2Q96A70 460 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 C18orf8Q96DM3 657 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 ZNF837Q96EG3 531 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 ZC3H10Q96K80 434 aaKnown RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PRICKLE1Q96MT3 831 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 RPRD1AQ96P16 312 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 GABRG3Q99928 467 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 DUSP15Q9H1R2 295 aaPredicted RBP11.03□□□□□ -0.64
CDK11A-222ENST00000498810 GANQ9H2C0 597 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 PARD6AQ9NPB6 346 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 VPS45Q9NRW7 570 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
CDK11A-222ENST00000498810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms