RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 URODP06132 367 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 SPARCP09486 303 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 ALDOCP09972 364 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 NPSP0C0P6 89 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 ACADMP11310 421 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MYCLP12524 364 aaPredicted RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 CYP4B1P13584 511 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 TNNT1P13805 278 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 ARSAP15289 507 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MATN1P21941 496 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 NDUFS1P28331 727 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MLH1P40692 756 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 FOLR3P41439 243 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MVDP53602 400 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 WDR5P61964 334 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 DGCR2P98153 550 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 BYSLQ13895 437 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 EIF4A2Q14240 407 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 MFSD13AQ14CX5 517 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 PTPRRQ15256 657 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 GXYLT1Q4G148 440 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 RNASE12Q5GAN4 147 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 ZNF766Q5HY98 468 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 PLAC9Q5JTB6 97 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 PCID2Q5JVF3 399 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MFSD4BQ5TF39 518 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 DENND2CQ68D51 928 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 NAPEPLDQ6IQ20 393 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 TMCO3Q6UWJ1 677 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 SLC39A5Q6ZMH5 540 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 ZNF551Q7Z340 670 aaPredicted RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 GALNT5Q7Z7M9 940 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 PEG10Q86TG7 708 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 ARHGEF19Q8IW93 802 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 SCN4BQ8IWT1 228 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 C12orf76Q8N812 135 aaPredicted RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 BEND2Q8NDZ0 799 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 SRFBP1Q8NEF9 429 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 RP9Q8TA86 221 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 FUBP1Q96AE4 644 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 TREX2Q9BQ50 279 aaPredicted RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 HEMGNQ9BXL5 484 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 ADGRE3Q9BY15 652 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 CIPCQ9C0C6 399 aa3.99□□□□□ -1.77
CALD1-224ENST00000498254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.99□□□□□ -1.77
CALD1-224ENST00000498254 AURKAIP1Q9NWT8 199 aaPredicted RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 REXO2Q9Y3B8 237 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 TDRD9Q8NDG6 1382 aaKnown RBP3.99□□□□□ -1.77
CALD1-224ENST00000498254 CYP3A7-CYP3A51PA0A087WV96 503 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 TEX13CA0A0J9YWL9 993 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 hCG_1807616A0A1W2PRN6 198 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 SYNDIG1LA6NDD5 238 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 NPIPB15A6NHN6 443 aaPredicted RBP3.98□□□□□ -1.77
CALD1-224ENST00000498254 B4DLN1 442 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 K7ESM1 405 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 MPPED1O15442 326 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 TNFSF14O43557 240 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 GJB3O75712 270 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 METTL18O95568 372 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 STARD3NLO95772 234 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 MLYCDO95822 493 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 TTLL1O95922 423 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 SCGB1D1O95968 90 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 EGR2P11161 476 aaPredicted RBP3.98□□□□□ -1.77
CALD1-224ENST00000498254 AKR1B1P15121 316 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ALOX12P18054 663 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 RPS6KB1P23443 525 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 CYP3A7P24462 503 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 GSTM2P28161 218 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 DUSP1P28562 367 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 HNF1BP35680 557 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 HADHAP40939 763 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 CPA2P48052 419 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 CTCFP49711 727 aaPredicted RBP3.98□□□□□ -1.77
CALD1-224ENST00000498254 SNX16P57768 344 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 EEFSECP57772 596 aaKnown RBP3.98□□□□□ -1.77
CALD1-224ENST00000498254 UFM1P61960 85 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 PLP2Q04941 152 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 NEXNQ0ZGT2 675 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 PTP4A2Q12974 167 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 IL13RA2Q14627 380 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 R3HDM1Q15032 1099 aaKnown RBP3.98□□□□□ -1.77
CALD1-224ENST00000498254 MED22Q15528 200 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 CNGA3Q16281 694 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 PRICKLE4Q2TBC4 344 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 AWAT1Q58HT5 328 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 RILPL1Q5EBL4 403 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ZNF667Q5HYK9 610 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 NAA35Q5VZE5 725 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 MTFR2Q6P444 385 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 KLHL24Q6TFL4 600 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 Q6ZNX1 250 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 BRSK2Q8IWQ3 736 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ADGRF3Q8IZF5 1079 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 LCORLQ8N3X6 602 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ZNF366Q8N895 744 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ZMIZ2Q8NF64 920 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 ETNPPLQ8TBG4 499 aa3.98□□□□□ -1.77
CALD1-224ENST00000498254 CREB3L4Q8TEY5 395 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms