RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MSANTD2Q6P1R3 559 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 CNGA4Q8IV77 575 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 SMC5Q8IY18 1101 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ADPRHL1Q8NDY3 354 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 SRFBP1Q8NEF9 429 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 DENND1AQ8TEH3 1009 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ASB12Q8WXK4 309 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 EID2BQ96D98 161 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ZNF845Q96IR2 970 aaPredicted RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 PLEKHF1Q96S99 279 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 TRIM2Q9C040 744 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 WDR12Q9GZL7 423 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 UPF2Q9HAU5 1272 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 PDGFCQ9NRA1 345 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 DDX19BQ9UMR2 479 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 HEMK1Q9Y5R4 338 aaPredicted RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 SETD1AO15047 1707 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 A0A1W2PP64 1363 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 KIF20BQ96Q89 1820 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 YEATS2Q9ULM3 1422 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 CDK12Q9NYV4 1490 aaPredicted RBP5.41□□□□□ -1.54
SSR3-209ENST00000498205 CCDC187A0A096LP49 1063 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 C3orf70A6NLC5 250 aaPredicted RBP5.41□□□□□ -1.54
SSR3-209ENST00000498205 FCHO1O14526 889 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 INPPL1O15357 1258 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 IPO8O15397 1037 aaKnown RBP5.41□□□□□ -1.54
SSR3-209ENST00000498205 TAF5LO75529 589 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 ENO1P06733 434 aaKnown RBP5.41□□□□□ -1.54
SSR3-209ENST00000498205 PTGER1P34995 402 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 WDR93Q6P2C0 686 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 TMEM88Q6PEY1 159 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 TRABD2AQ86V40 505 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 LAS2Q8IYD9 372 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 PRR11Q96HE9 360 aaPredicted RBP5.41□□□□□ -1.54
SSR3-209ENST00000498205 SLC29A3Q9BZD2 475 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 VPS4AQ9UN37 437 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 PCDHB2Q9Y5E7 798 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 ALKQ9UM73 1620 aa5.41□□□□□ -1.54
SSR3-209ENST00000498205 CPSF1Q10570 1443 aaKnown RBP5.4□□□□□ -1.54
SSR3-209ENST00000498205 EDC4Q6P2E9 1401 aaKnown RBP5.4□□□□□ -1.54
SSR3-209ENST00000498205 LRRC7Q96NW7 1537 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 A0A087WV62 115 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 KCNU1A8MYU2 1149 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 PCDH17O14917 1159 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 PIP5K1BO14986 540 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 LARGE1O95461 756 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 ITGA2BP08514 1039 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 PTMSP20962 102 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 NDUFS1P28331 727 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 CDK7P50613 346 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 ID2Q02363 134 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 SPARCL1Q14515 664 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 KPNB1Q14974 876 aaKnown RBP5.4□□□□□ -1.54
SSR3-209ENST00000498205 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 ELF2Q15723 593 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 SUPT20HL1Q3ZLR7 823 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 SLC9C1Q4G0N8 1177 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 PXDC1Q5TGL8 231 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 RINT1Q6NUQ1 792 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 C1QL2Q7Z5L3 287 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
SSR3-209ENST00000498205 IPO4Q8TEX9 1081 aaKnown RBP5.4□□□□□ -1.54
SSR3-209ENST00000498205 KAT2BQ92831 832 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 SH2D3AQ9BRG2 576 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 KLHL13Q9P2N7 655 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 CDC23Q9UJX2 597 aa5.4□□□□□ -1.54
SSR3-209ENST00000498205 ZNF335Q9H4Z2 1342 aaPredicted RBP5.4□□□□□ -1.55
SSR3-209ENST00000498205 PTCH1Q13635 1447 aa5.4□□□□□ -1.55
SSR3-209ENST00000498205 NCOA3Q9Y6Q9 1424 aa5.4□□□□□ -1.55
SSR3-209ENST00000498205 CPS1P31327 1500 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 EFCAB8A8MWE9 144 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 SYT5O00445 386 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 NKX2-8O15522 239 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 PLAUP00749 431 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 FGBP02675 491 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 TFEBP19484 476 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 TMPOP42166 694 aaKnown RBP5.39□□□□□ -1.55
SSR3-209ENST00000498205 ARHGAP25P42331 645 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 VPS41P49754 854 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 ZNF81P51508 661 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 CFHR1Q03591 330 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 TLE3Q04726 772 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 IDI1Q13907 227 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 ZACNQ401N2 412 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 TRIM60Q495X7 471 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 AWAT1Q58HT5 328 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 ATPAF1Q5TC12 328 aaPredicted RBP5.39□□□□□ -1.55
SSR3-209ENST00000498205 C1orf228Q6PIY5 440 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 ATF7IPQ6VMQ6 1270 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 SLC22A17Q8WUG5 538 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 PIGKQ92643 395 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 C18orf8Q96DM3 657 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 FCRL5Q96RD9 977 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 SIGLEC11Q96RL6 698 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
SSR3-209ENST00000498205 FSCN3Q9NQT6 498 aa5.39□□□□□ -1.55
SSR3-209ENST00000498205 ASNSD1Q9NWL6 643 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms