RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 COLEC12Q5KU26 742 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
TRIM27-207ENST00000498117 CCDC81Q6ZN84 652 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 TMC6Q7Z403 805 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
TRIM27-207ENST00000498117 UNC45BQ8IWX7 931 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 ANKRD52Q8NB46 1076 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 NDRG1Q92597 394 aaKnown RBP13.12□□□□□ -0.31
TRIM27-207ENST00000498117 DHX58Q96C10 678 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 GRAMD1AQ96CP6 724 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 KLHDC7BQ96G42 594 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 MRGPRX3Q96LB0 322 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
TRIM27-207ENST00000498117 EVA1BQ9NVM1 165 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 STIM2Q9P246 746 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 INTS6Q9UL03 887 aaKnown RBP13.12□□□□□ -0.31
TRIM27-207ENST00000498117 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
TRIM27-207ENST00000498117 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 TTC34A8MYJ7 566 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 MOCS3O95396 460 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 IL1BP01584 269 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 ALPPL2P10696 532 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 NFATC3Q12968 1075 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 BSPRYQ5W0U4 402 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 ARHGAP17Q68EM7 881 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 STK40Q8N2I9 435 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 TTC39CQ8N584 583 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 EDEM1Q92611 657 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 SLC46A1Q96NT5 459 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 DDX50Q9BQ39 737 aaKnown RBP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM27-207ENST00000498117 OSBPL2Q9H1P3 480 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 ABCC13Q9NSE7 274 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 KLHL11Q9NVR0 708 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 CYTH4Q9UIA0 394 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 AHCTF1Q8WYP5 2266 aa13.11□□□□□ -0.31
TRIM27-207ENST00000498117 GOLGA6L7A0A1B0GV03 622 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 PRAMEF26H0Y7S4 382 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 FFAR2O15552 330 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 SLC7A4O43246 635 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 ACSL4O60488 711 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 RNGTTO60942 597 aaKnown RBP13.1□□□□□ -0.31
TRIM27-207ENST00000498117 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
TRIM27-207ENST00000498117 NNMTP40261 264 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 SKOR1P84550 965 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 ECT2LQ008S8 904 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
TRIM27-207ENST00000498117 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 RNF219Q5W0B1 726 aaPredicted RBP13.1□□□□□ -0.31
TRIM27-207ENST00000498117 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 BHLHA9Q7RTU4 235 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 TRIM69Q86WT6 500 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 HJURPQ8NCD3 748 aaPredicted RBP13.1□□□□□ -0.31
TRIM27-207ENST00000498117 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 MAGEF1Q9HAY2 307 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 SLCO3A1Q9UIG8 710 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 SATB2Q9UPW6 733 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
TRIM27-207ENST00000498117 NEMP2A6NFY4 417 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 XPO1O14980 1071 aaKnown RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 SLC6A4P31645 630 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 DRD3P35462 400 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 VAMP7P51809 220 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 CDH18Q13634 790 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 SETMARQ53H47 684 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 FAM133BQ5BKY9 247 aaKnown RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 C3orf38Q5JPI3 329 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 PITRM1Q5JRX3 1037 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 C6orf132Q5T0Z8 1188 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 ZNF574Q6ZN55 896 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-207ENST00000498117 ATG14Q6ZNE5 492 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
TRIM27-207ENST00000498117 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms