RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PLIN3O60664 434 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 FBXO21O94952 628 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 HMGCRP04035 888 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 FGF3P11487 239 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 NANOGP8Q6NSW7 305 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 CDC42EP5Q6NZY7 148 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 PGM2L1Q6PCE3 622 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 MAVSQ7Z434 540 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 IL31RAQ8NI17 732 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 LPGAT1Q92604 370 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 HTRA1Q92743 480 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SIAEQ9HAT2 523 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 DDX28Q9NUL7 540 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 PAK5Q9P286 719 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 GMPR2Q9P2T1 348 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 PSAT1Q9Y617 370 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SPATA31A6Q5VVP1 1343 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SPAG6O75602 509 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 ARSAP15289 507 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 CDH8P55286 799 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 WNT7BP56706 349 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 IL1RL1Q01638 556 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 PTPN20Q4JDL3 420 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 AGKQ53H12 422 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SEL1L3Q68CR1 1132 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZFP1Q6P2D0 407 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 BBS12Q6ZW61 710 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 BSNDQ8WZ55 320 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 FBXL20Q96IG2 436 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 RPL10LQ96L21 214 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 DBNDD1Q9H9R9 158 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 CYP4F12Q9HCS2 524 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 PTPRHQ9HD43 1115 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SLC39A10Q9ULF5 831 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-223ENST00000497597 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 RGSL1A5PLK6 1076 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 KLF11O14901 512 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 PDGFRAP16234 1089 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MGAT1P26572 445 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TCF7P36402 384 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 POU5F1BQ06416 359 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 IKBKEQ14164 716 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 LSM12Q3MHD2 195 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MBLAC2Q68D91 279 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 DENND1BQ6P3S1 775 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 SCAIQ8N9R8 606 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 ELMO1Q92556 727 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 EXT2Q93063 718 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 RTKNQ9BST9 563 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 ILKAPQ9H0C8 392 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 FAM49BQ9NUQ9 324 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 PI4KBQ9UBF8 816 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 GABBR1Q9UBS5 961 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 POU2F3Q9UKI9 436 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 SORCS3Q9UPU3 1222 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TMED5Q9Y3A6 229 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 ATP6AP2A0A1C7CYW4 349 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 KANSL1LA0AUZ9 987 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TMEM233B4DJY2 109 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 PHGDHO43175 533 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 ATP6AP2O75787 350 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 NCAM1P13591 858 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MMP8P22894 467 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 EPHX2P34913 555 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 CRHR1P34998 444 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MYL6P60660 151 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 SLC10A2Q12908 348 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 GRAPQ13588 217 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MTMR1Q13613 665 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TBCELQ5QJ74 424 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 BRINP3Q76B58 766 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZNF677Q86XU0 584 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 FIBCD1Q8N539 461 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 PSD4Q8NDX1 1056 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 GRAPLQ8TC17 118 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 DHRS1Q96LJ7 313 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 OMDQ99983 421 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 TRIM8Q9BZR9 551 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 EHD1Q9H4M9 534 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 MRGBPQ9NV56 204 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 IGSF9Q9P2J2 1179 aa10.85□□□□□ -0.67
TRAPPC12-223ENST00000497597 GARSP41250 739 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 GABRB2P47870 512 aa10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 PSME3P61289 254 aa10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 TFDP2Q14188 446 aa10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 TMC5Q6UXY8 1006 aa10.84□□□□□ -0.67
TRAPPC12-223ENST00000497597 SPNS2Q8IVW8 549 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms