RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 LONRF2Q1L5Z9 754 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 LY6G5CQ5SRR4 150 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 FYB2Q5VWT5 728 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 RHBDF2Q6PJF5 856 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 TMCO3Q6UWJ1 677 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 TFAP2DQ7Z6R9 452 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 YAF2Q8IY57 180 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 DDI1Q8WTU0 396 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 TUBB2BQ9BVA1 445 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 NDFIP2Q9NV92 336 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 MARK1Q9P0L2 795 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 THEGQ9P2T0 379 aa18.8■□□□□ 0.6
RGP1-202ENST00000496906 COL6A3P12111 3177 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 PDE2AO00408 941 aaPredicted RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 CHADO15335 359 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 CLDN11O75508 207 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 NFATC1O95644 943 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 PENKP01210 267 aaPredicted RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 CYBBP04839 570 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 CYP17A1P05093 508 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 ARSAP15289 507 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 TGM2P21980 687 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 HOXD9P28356 352 aaPredicted RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 PAFAH1B3Q15102 231 aaKnown RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 DHCR24Q15392 516 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 SIX1Q15475 284 aaPredicted RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 CCDC181Q5TID7 509 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 ADAT2Q7Z6V5 191 aaKnown RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 NPWQ8N729 165 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 RSAD2Q8WXG1 361 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 BHMTQ93088 406 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 NAP1L3Q99457 506 aaPredicted RBP18.79■□□□□ 0.6
RGP1-202ENST00000496906 KLC2Q9H0B6 622 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 EBF3Q9H4W6 596 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 HPS4Q9NQG7 708 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 DOCK4Q8N1I0 1966 aa18.79■□□□□ 0.6
RGP1-202ENST00000496906 APOC4-APOC2K7ER74 178 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 MFSD11O43934 449 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 APOC2P02655 101 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 MAPKAPK2P49137 400 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 GBE1Q04446 702 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 MAIP1Q8WWC4 291 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 NXPE3Q969Y0 559 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 TRMT61BQ9BVS5 477 aaKnown RBP18.78■□□□□ 0.6
RGP1-202ENST00000496906 KCNK12Q9HB15 430 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 DONSONQ9NYP3 566 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 PLK2Q9NYY3 685 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 LIMD1Q9UGP4 676 aa18.78■□□□□ 0.6
RGP1-202ENST00000496906 NEDD8-MDP1E9PL57 170 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.6
RGP1-202ENST00000496906 ADH1CP00326 375 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 PECAM1P16284 738 aaPredicted RBP18.77■□□□□ 0.6
RGP1-202ENST00000496906 OR1E1P30953 314 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 GDI1P31150 447 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 SERPINB6P35237 376 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 PAFAH1B1P43034 410 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 TNK2Q07912 1038 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 WHAMMP3Q1A5X7 153 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 NPNTQ6UXI9 565 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 UMODL1-AS1Q8N2C9 162 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 LZTR1Q8N653 840 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 HAUS1Q96CS2 278 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 BBS2Q9BXC9 721 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 ECT2Q9H8V3 914 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 RRAGDQ9NQL2 400 aaPredicted RBP18.77■□□□□ 0.6
RGP1-202ENST00000496906 DTLQ9NZJ0 730 aa18.77■□□□□ 0.6
RGP1-202ENST00000496906 SAE1Q9UBE0 346 aaPredicted RBP18.77■□□□□ 0.6
RGP1-202ENST00000496906 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 LOC730098B7Z3J9 87 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 ARNTLO00327 626 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 HOXC11O43248 304 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 ADH5P11766 374 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 SLC10A2Q12908 348 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 ZNF177Q13360 481 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 AAK1Q2M2I8 961 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 ANO4Q32M45 955 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 AFMIDQ63HM1 303 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 C1orf228Q6PIY5 440 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 ARHGAP12Q8IWW6 846 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 NOL6Q9H6R4 1146 aaKnown RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 L2HGDHQ9H9P8 463 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 IGSF9Q9P2J2 1179 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 CLEC4EQ9ULY5 219 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 TBC1D30Q9Y2I9 924 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 R3HDM2Q9Y2K5 976 aaKnown RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 HEY1Q9Y5J3 304 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 OTOL1A6NHN0 477 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 TYRP14679 529 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 NR2C2P49116 596 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 OTUD4Q01804 1114 aaKnown RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 GAD2Q05329 585 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 C6orf118Q5T5N4 469 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 CXorf57Q6NSI4 855 aaKnown RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 SETD3Q86TU7 594 aaPredicted RBP18.76■□□□□ 0.59
RGP1-202ENST00000496906 MFN1Q8IWA4 741 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 TP53INP2Q8IXH6 220 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 CARNMT1Q8N4J0 409 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 TTC13Q8NBP0 860 aa18.76■□□□□ 0.59
RGP1-202ENST00000496906 NETO2Q8NC67 525 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms