RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MAPKAPK2P49137 400 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 MMRN1Q13201 1228 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 TFDP3Q5H9I0 405 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 TFAP2DQ7Z6R9 452 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 NLRP14Q86W24 1093 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 NAT16Q8N8M0 369 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 RTL3Q8N8U3 475 aaKnown RBP22.38■■□□□ 1.17
C9orf3-222ENST00000496567 EXOC4Q96A65 974 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 MSANTD3Q96H12 275 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 ARHGEF4Q9NR80 690 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 DOCK4Q8N1I0 1966 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 ENC1O14682 589 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 OR1E1P30953 314 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 CDKN2BP42772 138 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 OXCT1P55809 520 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 ETF1P62495 437 aaKnown RBP22.38■■□□□ 1.17
C9orf3-222ENST00000496567 TAZQ16635 292 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 GAB4Q2WGN9 574 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 PREPLQ4J6C6 727 aaPredicted RBP22.38■■□□□ 1.17
C9orf3-222ENST00000496567 C6orf118Q5T5N4 469 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 SETD3Q86TU7 594 aaPredicted RBP22.38■■□□□ 1.17
C9orf3-222ENST00000496567 RALGPS2Q86X27 583 aaPredicted RBP22.38■■□□□ 1.17
C9orf3-222ENST00000496567 ETFBKMTQ8IXQ9 262 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 FIBINQ8TAL6 211 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 RNF157Q96PX1 679 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 CARD9Q9H257 536 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 CD320Q9NPF0 282 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 HEBP1Q9NRV9 189 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 FBXO10Q9UK96 956 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 TBC1D30Q9Y2I9 924 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 PIAS3Q9Y6X2 628 aa22.38■■□□□ 1.17
C9orf3-222ENST00000496567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-222ENST00000496567 KCNK3O14649 394 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 PYGMP11217 842 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 AMPD1P23109 780 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 PPP2R5EQ16537 467 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 SLC44A4Q53GD3 710 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 C1orf228Q6PIY5 440 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 NYAP1Q6ZVC0 841 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 PCDH19Q8TAB3 1148 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-222ENST00000496567 NECAB3Q96P71 396 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-222ENST00000496567 WDR24Q96S15 920 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 UHRF1Q96T88 793 aaPredicted RBP22.37■■□□□ 1.17
C9orf3-222ENST00000496567 DNAJC17Q9NVM6 304 aaKnown RBP22.37■■□□□ 1.17
C9orf3-222ENST00000496567 DEC1Q9P2X7 70 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 ZNF212Q9UDV6 495 aa22.37■■□□□ 1.17
C9orf3-222ENST00000496567 COL4A2P08572 1712 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 SPECC1L-ADORA2AF8WAN1 911 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 TULP3O75386 442 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 TUBB4AP04350 444 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 DGKGP49619 791 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 TFDP2Q14188 446 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 SEL1L2Q5TEA6 688 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 TMCO3Q6UWJ1 677 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 LZTR1Q8N653 840 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 NAPGQ99747 312 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-222ENST00000496567 KIAA1522Q9P206 1035 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-222ENST00000496567 WNT16Q9UBV4 365 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 DNAI1Q9UI46 699 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 CLEC4EQ9ULY5 219 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 EFR3BQ9Y2G0 817 aa22.36■■□□□ 1.17
C9orf3-222ENST00000496567 CTAGE9A4FU28 777 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 DCLK1O15075 740 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 ATP1A1P05023 1023 aaKnown RBP22.35■■□□□ 1.17
C9orf3-222ENST00000496567 ZFXP17010 805 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-222ENST00000496567 CTHP32929 405 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 PTPN7P35236 360 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 SERPINB6P35237 376 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 OPRD1P41143 372 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 SOX9P48436 509 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 SLC12A1Q13621 1099 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 C12orf40Q86WS4 652 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 RFX6Q8HWS3 928 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 C16orf45Q96MC5 204 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-222ENST00000496567 MUTYHQ9UIF7 546 aa22.35■■□□□ 1.17
C9orf3-222ENST00000496567 hCG_1818297A0A087WSY0 165 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 ILVBLA1L0T0 632 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 RHOCP08134 193 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 ZNF211Q13398 564 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-222ENST00000496567 DCAF12L1Q5VU92 463 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 GRAMD4Q6IC98 578 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 CXorf57Q6NSI4 855 aaKnown RBP22.34■■□□□ 1.17
C9orf3-222ENST00000496567 ZNF783Q6ZMS7 281 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 SUGP1Q8IWZ8 645 aaKnown RBP22.34■■□□□ 1.17
C9orf3-222ENST00000496567 UMODL1-AS1Q8N2C9 162 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 WFDC5Q8TCV5 224 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 PNKPQ96T60 521 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 OSBPL8Q9BZF1 889 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 FBXL21Q9UKT6 434 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 SLC27A6Q9Y2P4 619 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 COL4A3Q01955 1670 aa22.34■■□□□ 1.17
C9orf3-222ENST00000496567 KIF2AO00139 706 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-222ENST00000496567 APOL1O14791 398 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 CISD3P0C7P0 127 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 KRT10P13645 584 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 SLC6A11P48066 632 aa22.33■■□□□ 1.17
C9orf3-222ENST00000496567 MLF2Q15773 248 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-222ENST00000496567 FSCBQ5H9T9 825 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms