RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 XPO7Q9UIA9 1087 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 AGO2Q9UKV8 859 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ZBTB39O15060 712 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 SERPINB2P05120 415 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 GZMAP12544 262 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 MAGP20916 626 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 GARTP22102 1010 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NUDT1P36639 197 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FMO5P49326 533 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CABP4P57796 275 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 DYNLT1P63172 113 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TXNL4AP83876 142 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ITSN1Q15811 1721 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 HADHQ16836 314 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 MTX3Q5HYI7 312 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 UBAP2Q5T6F2 1119 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ZCCHC23Q6ZST2 131 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PHC2Q8IXK0 858 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TXNDC15Q96J42 360 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 C8orf37Q96NL8 207 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 KCTD14Q9BQ13 255 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CD320Q9NPF0 282 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FETUBQ9UGM5 382 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ANKRD26Q9UPS8 1709 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 RGS13O14921 159 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NCAM2O15394 837 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PRKAB2O43741 272 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 GLRA3O75311 464 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CD58P19256 250 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 OPRL1P41146 370 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PTPN9P43378 593 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 IKBKEQ14164 716 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 IL17AQ16552 155 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ALFQ53S48 1182 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 DENND5AQ6IQ26 1287 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 HMBOX1Q6NT76 420 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FRMD7Q6ZUT3 714 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 DHFR2Q86XF0 187 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 HERC6Q8IVU3 1022 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 COLGALT2Q8IYK4 626 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 SVOPQ8N4V2 548 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ABHD11Q8NFV4 315 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FBXO27Q8NI29 283 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 RP9Q8TA86 221 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 VANGL1Q8TAA9 524 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 EPS8L1Q8TE68 723 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TGFBRAP1Q8WUH2 860 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NXNL1Q96CM4 212 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 FAF2Q96CS3 445 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 NOL11Q9H8H0 719 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 ACTR3BQ9P1U1 418 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDHA6Q9UN73 950 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PLA2G4CQ9UP65 541 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CDYLQ9Y232 598 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDHA8Q9Y5H6 950 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 KCNE2Q9Y6J6 123 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 STON1Q9Y6Q2 735 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 DLG5Q8TDM6 1919 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 GAKO14976 1311 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
CRNKL1-205ENST00000496549 TCRBV7S2A1N4TA0A589 114 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 AXIN1O15169 862 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 FAM189A1O60320 539 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CPNE3O75131 537 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC4A1P02730 911 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CD48P09326 243 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GAP43P17677 238 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIM23P36406 574 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GP5P40197 560 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 MCAMP43121 646 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PLIN5Q00G26 463 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SQLEQ14534 574 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CCNYL2Q5T2Q4 361 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ATG9AQ7Z3C6 839 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CADM2Q8N3J6 435 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 AMER2Q8N7J2 671 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 BRSK1Q8TDC3 778 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 DCPSQ96C86 337 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CCDC106Q9BWC9 280 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SCN3BQ9NY72 215 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 TRMT6Q9UJA5 497 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GNB5O14775 395 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 IFNA14P01570 189 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 P4HBP07237 508 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CTRB1P17538 263 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 F8A1P23610 371 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GNL1P36915 607 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 OR3A3P47888 321 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 RPL10AP62906 217 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CYP4A11Q02928 519 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 KLF10Q13118 480 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms