RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 VCANP13611 3396 aa18.88■□□□□ 0.61
TSSC4-210ENST00000496468 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.87■□□□□ 0.61
TSSC4-210ENST00000496468 ZNF487B1APH4 448 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 DDX3YO15523 660 aaKnown RBP18.87■□□□□ 0.61
TSSC4-210ENST00000496468 TULP3O75386 442 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 GLULP15104 373 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 OPRD1P41143 372 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 HCAR3P49019 387 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 MAPKAPK2P49137 400 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 DGKGP49619 791 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 MMRN1Q13201 1228 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 ZNF177Q13360 481 aaPredicted RBP18.87■□□□□ 0.61
TSSC4-210ENST00000496468 RPS6KA1Q15418 735 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 SLC44A4Q53GD3 710 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 C6orf118Q5T5N4 469 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 GRAMD4Q6IC98 578 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 C1orf228Q6PIY5 440 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 WFDC5Q8TCV5 224 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 ALG3Q92685 438 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 RNF25Q96BH1 459 aaPredicted RBP18.87■□□□□ 0.61
TSSC4-210ENST00000496468 SLC2A11Q9BYW1 496 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 RETREG1Q9H6L5 497 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 TMEM248Q9NWD8 314 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 DONSONQ9NYP3 566 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.87■□□□□ 0.61
TSSC4-210ENST00000496468 DEC1Q9P2X7 70 aa18.87■□□□□ 0.61
TSSC4-210ENST00000496468 C3orf70A6NLC5 250 aaPredicted RBP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 ZRANB2O95218 330 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 RHOCP08134 193 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 OR1E1P30953 314 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 GNG11P61952 73 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 PRKCQQ04759 706 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 PREPLQ4J6C6 727 aaPredicted RBP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 IER5LQ5T953 404 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 NAIF1Q69YI7 327 aaPredicted RBP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 CXorf57Q6NSI4 855 aaKnown RBP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 MFSD7Q6UXD7 560 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 SPOCD1Q6ZMY3 1216 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 ANKS1BQ7Z6G8 1248 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 RCOR2Q8IZ40 523 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.86■□□□□ 0.61
TSSC4-210ENST00000496468 FAF2Q96CS3 445 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 P2RY13Q9BPV8 354 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 WNT16Q9UBV4 365 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 ZNF212Q9UDV6 495 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 CLEC4EQ9ULY5 219 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 JRKLQ9Y4A0 524 aa18.86■□□□□ 0.61
TSSC4-210ENST00000496468 WASH4PA8MWX3 477 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 DCXO43602 365 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 ERCC2P18074 760 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 PEX5P50542 639 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 OXCT1P55809 520 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 ZXDAP98168 799 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 LMAN2Q12907 356 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 PPP2R5EQ16537 467 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 ANKRD20A8PQ5CZ79 823 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 TXNDC11Q6PKC3 985 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 SETD3Q86TU7 594 aaPredicted RBP18.85■□□□□ 0.61
TSSC4-210ENST00000496468 SUGP1Q8IWZ8 645 aaKnown RBP18.85■□□□□ 0.61
TSSC4-210ENST00000496468 FIBINQ8TAL6 211 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 PNKPQ96T60 521 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 ABCB8Q9NUT2 735 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 DNAI1Q9UI46 699 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 GGA2Q9UJY4 613 aa18.85■□□□□ 0.61
TSSC4-210ENST00000496468 MAN2B1O00754 1011 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 ENC1O14682 589 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 DCLK1O15075 740 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 AMPD1P23109 780 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 IL4RP24394 825 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 HLA-FP30511 346 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SERPINB6P35237 376 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 DEKP35659 375 aaKnown RBP18.84■□□□□ 0.61
TSSC4-210ENST00000496468 CETN2P41208 172 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 CDKN2BP42772 138 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SLC6A11P48066 632 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 COPS2P61201 443 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 PON2Q15165 354 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 TFDP3Q5H9I0 405 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 FSCBQ5H9T9 825 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SEL1L2Q5TEA6 688 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 DCAF12L1Q5VU92 463 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 RFX6Q8HWS3 928 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 AHI1Q8N157 1196 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SIX5Q8N196 739 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 PHTF2Q8N3S3 785 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.84■□□□□ 0.61
TSSC4-210ENST00000496468 TERB1Q8NA31 727 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 WFIKKN2Q8TEU8 576 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 FAM3CQ92520 227 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SHDQ96IW2 340 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 TLR10Q9BXR5 811 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 MAK16Q9BXY0 300 aaKnown RBP18.84■□□□□ 0.61
TSSC4-210ENST00000496468 MUC3BQ9H195 1237 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 KIAA1522Q9P206 1035 aaPredicted RBP18.84■□□□□ 0.61
TSSC4-210ENST00000496468 FBXO10Q9UK96 956 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 TBC1D30Q9Y2I9 924 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 SLC27A6Q9Y2P4 619 aa18.84■□□□□ 0.61
TSSC4-210ENST00000496468 hCG_1818297A0A087WSY0 165 aa18.83■□□□□ 0.6
TSSC4-210ENST00000496468 KCNK3O14649 394 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms