RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ACP5P13686 325 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 APEHP13798 732 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 GALNSP34059 522 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 THBS3P49746 956 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 RBM5P52756 815 aaKnown RBP eCLIP4.18□□□□□ -1.74
CLK1-214ENST00000496205 TAS2R50P59544 299 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 UBE3AQ05086 875 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 CHRNDQ07001 517 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 LMOD3Q0VAK6 560 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 TBX2Q13207 712 aaPredicted RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 SLC9C2Q5TAH2 1124 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 MAP3K21Q5TCX8 1036 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 RETSATQ6NUM9 610 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 ACSM6Q6P461 480 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 SHC4Q6S5L8 630 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 KIRREL2Q6UWL6 708 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 MRPL10Q7Z7H8 261 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 TTC30AQ86WT1 665 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 GALNT4Q8N4A0 578 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 TMEM57Q8N5G2 664 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 C16orf52Q8NHV5 167 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 SLC2A12Q8TD20 617 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 OVCA2Q8WZ82 227 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 RRP36Q96EU6 259 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 REXO5Q96IC2 774 aaKnown RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 REEP2Q9BRK0 252 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 ELOVL1Q9BW60 279 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 CDCP1Q9H5V8 836 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 IL21RQ9HBE5 538 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 RXFP3Q9NSD7 469 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 FBXO28Q9NVF7 368 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 ASIC5Q9NY37 505 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 CCNL1Q9UK58 526 aaPredicted RBP4.18□□□□□ -1.74
CLK1-214ENST00000496205 DERAQ9Y315 318 aa4.18□□□□□ -1.74
CLK1-214ENST00000496205 NOTCH4Q99466 2003 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 VWA3AA6NCI4 1184 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 ADAM10O14672 748 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 EPB41L2O43491 1005 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 HNRNPA1P09651 372 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLK1-214ENST00000496205 PRF1P14222 555 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 IGHMBP2P38935 993 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 DGKQP52824 942 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 TLE2Q04725 743 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 RBMS2Q15434 407 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 AWAT1Q58HT5 328 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 L1TD1Q5T7N2 865 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 KYAT3Q6YP21 454 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 TRIM72Q6ZMU5 477 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 PARS2Q7L3T8 475 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 RAB11FIP4Q86YS3 637 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 SIRT6Q8N6T7 355 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 LINC01465Q8N7H1 131 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 PNPLA1Q8N8W4 532 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 FAM71DQ8N9W8 422 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 RP9Q8TA86 221 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 PIGOQ8TEQ8 1089 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 PPP1R10Q96QC0 940 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 MMS19Q96T76 1030 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 EIF3CQ99613 913 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 PHF7Q9BWX1 381 aaPredicted RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 ABHD10Q9NUJ1 306 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 LIN7CQ9NUP9 197 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 MGAT4CQ9UBM8 478 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 AMFRQ9UKV5 643 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 HSF4Q9ULV5 492 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 ADAMTS5Q9UNA0 930 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 SLC12A4Q9UP95 1085 aa4.17□□□□□ -1.74
CLK1-214ENST00000496205 UBE2J1Q9Y385 318 aaPredicted RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 RRP7AQ9Y3A4 280 aaKnown RBP4.17□□□□□ -1.74
CLK1-214ENST00000496205 FAM90A10PA6NDY2 464 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 MBD3L5A6NJ08 208 aaPredicted RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 C16orf96A6NNT2 1141 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 TBX18O95935 607 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 CENPBP07199 599 aaPredicted RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 CYP3A4P08684 503 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 CYP2A6P11509 494 aaPredicted RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 ATF7P17544 494 aaPredicted RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 GEMIN4P57678 1058 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 RBM6P78332 1123 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 MAPRE1Q15691 268 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 LEXMQ3ZCV2 418 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 ATG16L1Q676U5 607 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 FAM180BQ6P0A1 224 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 C1orf122Q6ZSJ8 110 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 MAATS1Q7Z4T9 603 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 VPS50Q96JG6 964 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 SNX18Q96RF0 628 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 SEC62Q99442 399 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 GPR63Q9BZJ6 419 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 USP29Q9HBJ7 922 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 MAP3K20Q9NYL2 800 aaKnown RBP4.16□□□□□ -1.74
CLK1-214ENST00000496205 NFU1Q9UMS0 254 aa4.16□□□□□ -1.74
CLK1-214ENST00000496205 GRM8O00222 908 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 PRYO14603 147 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 KLK10O43240 276 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 TMPRSS11DO60235 418 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 MBD4O95243 580 aa4.15□□□□□ -1.75
CLK1-214ENST00000496205 CPA1P15085 419 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms