RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	TAZ	Q16635	292 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	ANKRD20A8P	Q5CZ79	823 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	RABGAP1L	Q5R372	815 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	LRRC31	Q6UY01	552 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	NYAP1	Q6ZVC0	841 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	PHTF2	Q8N3S3	785 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	CARNMT1	Q8N4J0	409 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	PQLC3	Q8N755	202 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	CSGALNACT1	Q8TDX6	532 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	DNASE1L2	Q92874	299 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	LMLN	Q96KR4	655 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	KLC2	Q9H0B6	622 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	NOL6	Q9H6R4	1146 aa	Known RBP	13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197	FBXO10	Q9UK96	956 aa		13.89	□□□□□ -0.19
PTPN7-218	ENST00000496197		A0A1B0GVM2	712 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	TCAF2	A6NFQ2	919 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	MIF4GD	A9UHW6	222 aa	Known RBP	13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	TULP3	O75386	442 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CYBB	P04839	570 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CISD3	P0C7P0	127 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	HLA-F	P30511	346 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CXCR5	P32302	372 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CTH	P32929	405 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CD70	P32970	193 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CDH4	P55283	916 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	RWDD2B	P57060	319 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	PDK2	Q15119	407 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	MPP7	Q5T2T1	576 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	NCBP2-AS2	Q69YL0	99 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	SPOCD1	Q6ZMY3	1216 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	MFN1	Q8IWA4	741 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	EXD1	Q8NHP7	514 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	EZH1	Q92800	747 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	C16orf45	Q96MC5	204 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	UHRF1	Q96T88	793 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZNF670	Q9BS34	389 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	TMEM248	Q9NWD8	314 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	DNAI1	Q9UI46	699 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	CA14	Q9ULX7	337 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	PIAS3	Q9Y6X2	628 aa		13.88	□□□□□ -0.19
PTPN7-218	ENST00000496197	hCG_1818297	A0A087WSY0	165 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	KRBA1	A5PL33	1030 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	WASH4P	A8MWX3	477 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	SPECC1L-ADORA2A	F8WAN1	911 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197		H3BRJ5	948 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RHOQ	P17081	205 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CD72	P21854	359 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	MZF1	P28698	734 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ARL4A	P40617	200 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	HCAR3	P49019	387 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	KDSR	Q06136	332 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	LMAN2	Q12907	356 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RPS6KA1	Q15418	735 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	TMEM215	Q68D42	235 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CHST9	Q7L1S5	443 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ZSCAN30	Q86W11	494 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CCDC33	Q8N5R6	958 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	PLD5	Q8N7P1	536 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RTL3	Q8N8U3	475 aa	Known RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RNF157	Q96PX1	679 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	DNAJC17	Q9NVM6	304 aa	Known RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	INTS6	Q9UL03	887 aa	Known RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	JRKL	Q9Y4A0	524 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ATG2B	Q96BY7	2078 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197		A0A0D9SEW6	157 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	TCRBV7S2A1N4T	A0A589	114 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197		H0Y626	953 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	MFSD11	O43934	449 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CLDN11	O75508	207 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	MAP3K6	O95382	1288 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CSK	P41240	450 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	GEN1	Q17RS7	908 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	SLC44A4	Q53GD3	710 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	KAZN	Q674X7	775 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	NPNT	Q6UXI9	565 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CCDC50	Q8IVM0	306 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ARHGAP12	Q8IWW6	846 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	RCOR2	Q8IZ40	523 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	APCDD1	Q8J025	514 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	UBL4B	Q8N7F7	174 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	FIBIN	Q8TAL6	211 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ALG14	Q96F25	216 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	CELF6	Q96J87	481 aa	Known RBP	13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	HEMGN	Q9BXL5	484 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	ABCB8	Q9NUT2	735 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	TBC1D30	Q9Y2I9	924 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	OR51B4	Q9Y5P0	310 aa		13.87	□□□□□ -0.19
PTPN7-218	ENST00000496197	TYW5	A2RUC4	315 aa	Known RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	PRRT4	C9JH25	899 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	KCNK3	O14649	394 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	FGF10	O15520	208 aa	Predicted RBP	13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	DAPK3	O43293	454 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	OR1E1	P30953	314 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	HTR7	P34969	479 aa		13.86	□□□□□ -0.19
PTPN7-218	ENST00000496197	ACVRL1	P37023	503 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms