RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SERPINB12Q96P63 405 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PRMT1Q99873 361 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ROPN1BQ9BZX4 212 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ROPN1Q9HAT0 212 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ZMYND8Q9ULU4 1186 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 SHROOM3Q8TF72 1996 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 DOCK4Q8N1I0 1966 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 SMIM23A6NLE4 172 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 RASGRF2O14827 1237 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 MTSS1O43312 755 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 COCHO43405 550 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 TGM5O43548 720 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 CXCL14O95715 111 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 TPSB2P20231 275 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 IRAK1P51617 712 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 KCNQ1P51787 676 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 EPHB3P54753 998 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 TPSAB1Q15661 275 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 LONRF1Q17RB8 773 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 C6orf118Q5T5N4 469 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 RAP1GAP2Q684P5 730 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 NUGGCQ68CJ6 796 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 FBXL22Q6P050 247 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 LRRC31Q6UY01 552 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 PID1Q7Z2X4 250 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 TMC7Q7Z402 723 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 CROCCP2Q86T23 111 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 CAND1Q86VP6 1230 aaKnown RBP16.81■□□□□ 0.28
HLA-A-208ENST00000496081 NLRP14Q86W24 1093 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 MCUQ8NE86 351 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
HLA-A-208ENST00000496081 PYROXD1Q8WU10 500 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 PSMG2Q969U7 264 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 PGM2Q96G03 612 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 ZYG11BQ9C0D3 744 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 SLC39A8Q9C0K1 460 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 NACA2Q9H009 215 aa16.81■□□□□ 0.28
HLA-A-208ENST00000496081 PPARGC1AQ9UBK2 798 aaKnown RBP16.81■□□□□ 0.28
HLA-A-208ENST00000496081 IGLV3-10A0A075B6K4 115 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 E7EVH7 732 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 F5H423 210 aaPredicted RBP16.8■□□□□ 0.28
HLA-A-208ENST00000496081 DFFAO00273 331 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 AVILO75366 819 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 BMPR1AP36894 532 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 SLCO1A2P46721 670 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 GPX6P59796 221 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 COG7P83436 770 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 AFMIDQ63HM1 303 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 NADSYN1Q6IA69 706 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 TMEM150AQ86TG1 271 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 FBXO36Q8NEA4 188 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 TSGA13Q96PP4 275 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 ALG13Q9NP73 1137 aaKnown RBP16.8■□□□□ 0.28
HLA-A-208ENST00000496081 KLHL8Q9P2G9 620 aaPredicted RBP16.8■□□□□ 0.28
HLA-A-208ENST00000496081 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 NOVA2Q9UNW9 492 aaKnown RBP16.8■□□□□ 0.28
HLA-A-208ENST00000496081 ANAPC1Q9H1A4 1944 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 CLUHO75153 1309 aa16.8■□□□□ 0.28
HLA-A-208ENST00000496081 A0A087WUV0 522 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 DRGXA6NNA5 263 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TCEA3O75764 348 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 RHOQP17081 205 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 PSMB4P28070 264 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 PPP3CCP48454 512 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ERVFC1P60507 584 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ZBTB17Q13105 803 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 MTA1Q13330 715 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ALFQ53S48 1182 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ACBD5Q5T8D3 534 aaPredicted RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 LILRA6Q6PI73 481 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ARHGAP36Q6ZRI8 547 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF534Q76KX8 674 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 IGDCC3Q8IVU1 814 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 AGGF1Q8N302 714 aaeCLIP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 IGSF8Q969P0 613 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 RNF38Q9H0F5 515 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 VPS37BQ9H9H4 285 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TEX264Q9Y6I9 313 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 GOLGA6L7A0A1B0GV03 622 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 C2orf78A6NCI8 922 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 MAFKO60675 156 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 CNTN5O94779 1100 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
HLA-A-208ENST00000496081 CCNCP24863 283 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 CTNNB1P35222 781 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ELK3P41970 407 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 STAT4Q14765 748 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TEX44Q53QW1 395 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 CAPN12Q6ZSI9 719 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
HLA-A-208ENST00000496081 ATPAF2Q8N5M1 289 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms