RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ACSL4O60488 711 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 WISP1O95388 367 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 YEATS4O95619 227 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 CSKP41240 450 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 SLC11A2P49281 568 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 PPP3CAQ08209 521 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 ARHGAP40Q5TG30 622 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 NUGGCQ68CJ6 796 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 INTS8Q75QN2 995 aaKnown RBP13.94□□□□□ -0.18
COL1A1-209ENST00000495677 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 SLC25A45Q8N413 288 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 CCDC150Q8NCX0 1101 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 OR4C6Q8NH72 309 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 OR14C36Q8NHC7 312 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 KCTD13Q8WZ19 329 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 NDRG1Q92597 394 aaKnown RBP13.94□□□□□ -0.18
COL1A1-209ENST00000495677 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 CPNE5Q9HCH3 593 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 ERVW-1Q9UQF0 538 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 MTMR6Q9Y217 621 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3DA0A087WVF3 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3IA0A087WXS9 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3EA0A087X179 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3KA0A087X1G2 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3FA6NER0 549 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-209ENST00000495677 YJEFN3A6XGL0 299 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3LB9A6J9 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 E7ENQ6 273 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TRIM38O00635 465 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 SLC7A4O43246 635 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 RNGTTO60942 597 aaKnown RBP13.93□□□□□ -0.18
COL1A1-209ENST00000495677 GP1BAP07359 652 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3HP0C7X1 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 CKMT1AP12532 417 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 SLC6A4P31645 630 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 GTF2H1P32780 548 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 DRD3P35462 400 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 GCLMP48507 274 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 SKOR1P84550 965 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3GQ6DHY5 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3CQ6IPX1 549 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 RFWD3Q6PCD5 774 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TBC1D3Q8IZP1 549 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-209ENST00000495677 GRAMD1AQ96CP6 724 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 DEPDC7Q96QD5 511 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
COL1A1-209ENST00000495677 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 LRRC4Q9HBW1 653 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 ASCL3Q9NQ33 180 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 CISHQ9NSE2 258 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 CYTH4Q9UIA0 394 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 PCDHB1Q9Y5F3 818 aa13.93□□□□□ -0.18
COL1A1-209ENST00000495677 PIEZO2Q9H5I5 2752 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 GOLGA6L7A0A1B0GV03 622 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 TTC34A8MYJ7 566 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 K7ENP7 123 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 TULP2O00295 520 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 CALUO43852 315 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 OPA1O60313 960 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 AFMP43652 599 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 ECT2LQ008S8 904 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 BST2Q10589 180 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 LY6DQ14210 128 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 ELAVL3Q14576 367 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 STAT4Q14765 748 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 KMT5BQ4FZB7 885 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 KRT39Q6A163 491 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 INO80CQ6PI98 192 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 HJURPQ8NCD3 748 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 KCNE4Q8WWG9 221 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 EDEM1Q92611 657 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
COL1A1-209ENST00000495677 HECTD1Q9ULT8 2610 aa13.92□□□□□ -0.18
COL1A1-209ENST00000495677 TYW5A2RUC4 315 aaKnown RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 PRAMEF26H0Y7S4 382 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 KLK10O43240 276 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 MSI1O43347 362 aaKnown RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 PLRG1O43660 514 aaKnown RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 MOCS3O95396 460 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 MPOP05164 745 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 GIMD1P0DJR0 217 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 DGKAP23743 735 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 MZF1P28698 734 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-209ENST00000495677 CSRP3P50461 194 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 DAOAP59103 153 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 PPP2CBP62714 309 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 PPP2CAP67775 309 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 GABREP78334 506 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 DAB2P98082 770 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 ADIGQ0VDE8 80 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 HS1BP3Q53T59 392 aa13.91□□□□□ -0.18
COL1A1-209ENST00000495677 FSCBQ5H9T9 825 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms