RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RIC8AQ9NPQ8 531 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 ZNF302Q9NR11 478 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 TMEM161AQ9NX61 479 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 EIF2B4Q9UI10 523 aaKnown RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 LZTS1Q9Y250 596 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 TESMINQ9Y4I5 508 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 ZDBF2Q9HCK1 2354 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 SMCO2A6NFE2 343 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FAM86B1E9PN63 330 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 LEFTY2O00292 366 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FAM20BO75063 409 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 C22orf31O95567 290 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FOSP01100 380 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 VTNP04004 478 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 ADRB1P08588 477 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FAM86B2P0C5J1 330 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 MYBP10242 640 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 LAG3P18627 525 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 APOBEC3AP31941 199 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 CRYBB1P53674 252 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 NAPAP54920 295 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 CTXN1P60606 82 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 TOB2Q14106 344 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 CCDC157Q569K6 752 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 ZNF484Q5JVG2 852 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FAM160B1Q5W0V3 765 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 TRMT1LQ7Z2T5 733 aaKnown RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 SPRED1Q7Z699 444 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 MICU3Q86XE3 530 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 PLXDC1Q8IUK5 500 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 SYT12Q8IV01 421 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FMNL3Q8IVF7 1028 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 WDR75Q8IWA0 830 aaKnown RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 METTL13Q8N6R0 699 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 IL17DQ8TAD2 202 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 HPS3Q969F9 1004 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 CLIP3Q96DZ5 547 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 TMEM117Q9H0C3 514 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 C11orf54Q9H0W9 315 aaPredicted RBP7.12□□□□□ -1.27
VIM-207ENST00000495528 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 ENTPD7Q9NQZ7 604 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 FBXO34Q9NWN3 711 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 SORCS3Q9UPU3 1222 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 CLCA2Q9UQC9 943 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 PCDHA3Q9Y5H8 950 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 TRIOO75962 3097 aa7.12□□□□□ -1.27
VIM-207ENST00000495528 COL1A2P08123 1366 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 FSD2A1L4K1 749 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 C2CD4DB7Z1M9 353 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 POMCP01189 267 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 FTLP02792 175 aaPredicted RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 WEE2P0C1S8 567 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SBK3P0C264 359 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SRGAP2BP0DMP2 458 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 HOXB8P17481 243 aaPredicted RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 SLC6A2P23975 617 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 ANP32AP39687 249 aaKnown RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 CLCN3P51790 818 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 CHN2P52757 468 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 NLRP11P59045 1033 aaKnown RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 NHLH2Q02577 135 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 KRT17Q04695 432 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 STK3Q13188 491 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 RAB39AQ14964 217 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 ANKRD1Q15327 319 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 JAKMIP3Q5VZ66 844 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 MIS18BP1Q6P0N0 1132 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SYNE3Q6ZMZ3 975 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SEM1Q6ZVN7 128 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 MED25Q71SY5 747 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 EPM2AIP1Q7L775 607 aaPredicted RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 NIPA1Q7RTP0 329 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 ASCL5Q7RTU5 278 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 PLA2G4DQ86XP0 818 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 TMEM105Q8N8V8 129 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 MRPL43Q8N983 215 aaKnown RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 RGMAQ96B86 450 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 ZNF668Q96K58 619 aaPredicted RBP7.11□□□□□ -1.27
VIM-207ENST00000495528 NDC1Q9BTX1 674 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SMOC2Q9H3U7 446 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 POMKQ9H5K3 350 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 SPG21Q9NZD8 308 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 TPCN1Q9ULQ1 816 aa7.11□□□□□ -1.27
VIM-207ENST00000495528 CACNA1HO95180 2353 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 PTPRZ1P23471 2315 aaPredicted RBP7.1□□□□□ -1.27
VIM-207ENST00000495528 IGLV3-22A0A075B6J6 115 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 KLF18A0A0U1RQI7 1052 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 DRGXA6NNA5 263 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 NT5C1B-RDH14C9J2C7 533 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 PROB1E7EW31 1015 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 IPO5O00410 1097 aaKnown RBP7.1□□□□□ -1.27
VIM-207ENST00000495528 ADAMTS3O15072 1205 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
VIM-207ENST00000495528 CXCL14O95715 111 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 CD1AP06126 327 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 LPOP22079 712 aaPredicted RBP7.1□□□□□ -1.27
VIM-207ENST00000495528 FGFR4P22455 802 aa7.1□□□□□ -1.27
VIM-207ENST00000495528 MGAT1P26572 445 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms