RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 VN1R2Q8NFZ6 395 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SCAMP5Q8TAC9 235 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 HTR3CQ8WXA8 447 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 AUTS2Q8WXX7 1259 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 LRRC39Q96DD0 335 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 PGM2Q96G03 612 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 MSLNLQ96KJ4 702 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 C1orf74Q96LT6 269 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SERPINB12Q96P63 405 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SEMA4AQ9H3S1 761 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 IGFLR1Q9H665 355 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RETREG1Q9H6L5 497 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SAYSD1Q9NPB0 183 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ARHGEF4Q9NR80 690 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 TMEM30AQ9NV96 361 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 PRKAG3Q9UGI9 489 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 XPO7Q9UIA9 1087 aaKnown RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ZMYM5Q9UJ78 669 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 CLUHO75153 1309 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 DOCK8Q8NF50 2099 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 A0A1W2PQH9 124 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 WDR27A2RRH5 827 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PER2O15055 1255 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ALOX15BO15296 676 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 OPHN1O60890 802 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 TCEA3O75764 348 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 GLP2RO95838 553 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 AGTP01019 485 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 IGLV3-25P01717 112 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 GSTA2P09210 222 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ZSCAN5DPP0CG00 497 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ERCC2P18074 760 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 EPHB2P29323 1055 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 TBX4P57082 545 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 NRG1Q02297 640 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ZNF844Q08AG5 666 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 AP1B1Q10567 949 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 NR1H3Q13133 447 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 SEMA3BQ13214 749 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 DPYSQ14117 519 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 CCDC85BQ15834 202 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PPM1LQ5SGD2 360 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ATAT1Q5SQI0 421 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ITPRIPL1Q6GPH6 555 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ITIH5Q86UX2 942 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PALM2Q8IXS6 379 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PYROXD2Q8N2H3 581 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 NAT8LQ8N9F0 302 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ATAD1Q8NBU5 361 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PYROXD1Q8WU10 500 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PRCCQ92733 491 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 TBC1D31Q96DN5 1066 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PGLYRP2Q96PD5 576 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 CNOT10Q9H9A5 744 aaKnown RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 HAUS2Q9NVX0 235 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 UXTQ9UBK9 157 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 TRHDEQ9UKU6 1024 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 NFS1Q9Y697 457 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ZFP37Q9Y6Q3 630 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-214ENST00000495485 C2orf16Q68DN1 1984 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 DOCK6Q96HP0 2047 aa10.55□□□□□ -0.72
HDAC3-214ENST00000495485 ZNF638Q14966 1978 aaKnown RBP10.54□□□□□ -0.72
HDAC3-214ENST00000495485 TLDC2A0PJX2 215 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 SLC38A8A6NNN8 435 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 SOBPA7XYQ1 873 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 PRRG1O14668 218 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 DCLK1O15075 740 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 TBX10O75333 385 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 NEBLO76041 1014 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 LRG1P02750 347 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 C8AP07357 584 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 VCANP13611 3396 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 ETS1P14921 441 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 TPSB2P20231 275 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 KCNA5P22460 613 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 LTBRP36941 435 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 PITX1P78337 314 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-214ENST00000495485 RING1Q06587 406 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 PDIA2Q13087 525 aaKnown RBP10.54□□□□□ -0.72
HDAC3-214ENST00000495485 DUSP4Q13115 394 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 CBLBQ13191 982 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 PRPSAP1Q14558 356 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 TRIP4Q15650 581 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-214ENST00000495485 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 KYNUQ16719 465 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 PARP6Q2NL67 630 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 KLHL38Q2WGJ6 581 aa10.54□□□□□ -0.72
HDAC3-214ENST00000495485 C10orf120Q5SQS8 335 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms