RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 TAF4BQ92750 862 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 EXTL1Q92935 676 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 SGF29Q96ES7 293 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 ATXN7L3BQ96GX2 97 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 APOLD1Q96LR9 279 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 CALN1Q9BXU9 219 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 DUSP16Q9BY84 665 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 KDM4CQ9H3R0 1056 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 MTG2Q9H4K7 406 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 SYNDIG1Q9H7V2 258 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 NCKIPSDQ9NZQ3 722 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 STIM2Q9P246 746 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 CGNQ9P2M7 1197 aaKnown RBP6.39□□□□□ -1.39
CBX1-205ENST00000495350 TJP2Q9UDY2 1190 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 ATXN7L1Q9ULK2 861 aaPredicted RBP6.39□□□□□ -1.39
CBX1-205ENST00000495350 HBS1LQ9Y450 684 aaKnown RBP6.39□□□□□ -1.39
CBX1-205ENST00000495350 USP3Q9Y6I4 520 aa6.39□□□□□ -1.39
CBX1-205ENST00000495350 SPTBN1Q01082 2364 aaKnown RBP6.39□□□□□ -1.39
CBX1-205ENST00000495350 CPED1A4D0V7 1026 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CDRT15L2A8MXV6 281 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 C1QTNF3-AMACRE9PGA6 284 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 RIOK3O14730 519 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 IRAK2O43187 625 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SLC7A4O43246 635 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 RNGTTO60942 597 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 TCEA3O75764 348 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 PIAS2O75928 621 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 TNFSF15O95150 251 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SRPRAP08240 638 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 ITGA2BP08514 1039 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 THEGLP0DJG4 465 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CD58P19256 250 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 MZF1P28698 734 aaPredicted RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 GJB2P29033 226 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CSKP41240 450 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CASP4P49662 377 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 HNRNPKP61978 463 aaKnown RBP eCLIP6.38□□□□□ -1.39
CBX1-205ENST00000495350 SKOR1P84550 965 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 AMPD3Q01432 767 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SERINC3Q13530 473 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 ELAVL3Q14576 367 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 FAM26FQ5R3K3 315 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 C9orf64Q5T6V5 341 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 FAM46CQ5VWP2 391 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CLEC14AQ86T13 490 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 TRIM69Q86WT6 500 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 JAMLQ86YT9 394 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 UNC45BQ8IWX7 931 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 ZC3H3Q8IXZ2 948 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 STK40Q8N2I9 435 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SLC25A45Q8N413 288 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CARNMT1Q8N4J0 409 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 AADATQ8N5Z0 425 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 KDM1BQ8NB78 822 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 HJURPQ8NCD3 748 aaPredicted RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 CCDC150Q8NCX0 1101 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 GOLGA5Q8TBA6 731 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 ARRDC3Q96B67 414 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 ELMO3Q96BJ8 720 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 MYOCQ99972 504 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 DDX50Q9BQ39 737 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 KLHL11Q9NVR0 708 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 UCKL1Q9NWZ5 548 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SEPT10Q9P0V9 454 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 TFIP11Q9UBB9 837 aaKnown RBP6.38□□□□□ -1.39
CBX1-205ENST00000495350 CYTH4Q9UIA0 394 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 SSUH2Q9Y2M2 353 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 FLNCQ14315 2725 aa6.38□□□□□ -1.39
CBX1-205ENST00000495350 CCDC187A0A096LP49 1063 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 LRRIQ3A6PVS8 624 aaPredicted RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 TTC34A8MYJ7 566 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 H3BM21 787 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 SCAMP1O15126 338 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 TGFB1I1O43294 461 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 PLRG1O43660 514 aaKnown RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 LZTS3O60299 673 aaPredicted RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 RTN2O75298 545 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ZBED1O96006 694 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 CR2P20023 1033 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 TGM2P21980 687 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 AKT2P31751 481 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ASPAP45381 313 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 SGSHP51688 502 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 TKTL1P51854 596 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ECT2LQ008S8 904 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 CCDC15Q0P6D6 951 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 INCA1Q0VD86 236 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 KCNMA1Q12791 1236 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ZNF177Q13360 481 aaPredicted RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 SPIDRQ14159 915 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 ARID5BQ14865 1188 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 CDKN3Q16667 212 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 LINC00303Q3SY05 128 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 PITRM1Q5JRX3 1037 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 PPP1R26Q5T8A7 1209 aaPredicted RBP6.37□□□□□ -1.39
CBX1-205ENST00000495350 PIK3R6Q5UE93 754 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 NUGGCQ68CJ6 796 aa6.37□□□□□ -1.39
CBX1-205ENST00000495350 SPOPLQ6IQ16 392 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms