RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 NCDNQ9UBB6 729 aa16.43■□□□□ 0.22
LIME1-209ENST00000494776 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
LIME1-209ENST00000494776 CNOT8Q9UFF9 292 aaKnown RBP16.43■□□□□ 0.22
LIME1-209ENST00000494776 INVSQ9Y283 1065 aa16.43■□□□□ 0.22
LIME1-209ENST00000494776 A0A1W2PQF6 199 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 E9PAM4 449 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 CCP110O43303 1012 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 ASLP04424 464 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 ADRA1BP35368 520 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 SLC12A1Q13621 1099 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 BYSLQ13895 437 aaKnown RBP16.42■□□□□ 0.22
LIME1-209ENST00000494776 RAB6CQ53S08 254 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 PPP1R15BQ5SWA1 713 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 PLEKHA7Q6IQ23 1121 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 CENPIQ92674 756 aaPredicted RBP16.42■□□□□ 0.22
LIME1-209ENST00000494776 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 LMLNQ96KR4 655 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 SPACA7Q96KW9 195 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 CNPY3Q9BT09 278 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 RAB6CQ9H0N0 254 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 MRPL47Q9HD33 250 aaKnown RBP16.42■□□□□ 0.22
LIME1-209ENST00000494776 GMEB2Q9UKD1 530 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 SCINQ9Y6U3 715 aa16.42■□□□□ 0.22
LIME1-209ENST00000494776 RIF1Q5UIP0 2472 aaKnown RBP16.42■□□□□ 0.22
LIME1-209ENST00000494776 I6L893 689 aaPredicted RBP16.41■□□□□ 0.22
LIME1-209ENST00000494776 HLA-EP13747 358 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 GABRG2P18507 467 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 PRKCHP24723 683 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 PSMA2P25787 234 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 IRAK1P51617 712 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 HDAC4P56524 1084 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 PLEKHG6Q3KR16 790 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 SARM1Q6SZW1 724 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 KIAA1324Q6UXG2 1013 aaKnown RBP16.41■□□□□ 0.22
LIME1-209ENST00000494776 TMC6Q7Z403 805 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 SLFN11Q7Z7L1 901 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 APCDD1Q8J025 514 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 RUBCNQ92622 972 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 MUC3BQ9H195 1237 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 ISCUQ9H1K1 167 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 MPP6Q9NZW5 540 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 OR12D3Q9UGF7 316 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 INTS6Q9UL03 887 aaKnown RBP16.41■□□□□ 0.22
LIME1-209ENST00000494776 FANCMQ8IYD8 2048 aa16.41■□□□□ 0.22
LIME1-209ENST00000494776 A0A087X0T9 212 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 DRGXA6NNA5 263 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 DCLK1O15075 740 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 MAP3K13O43283 966 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 CNTN5O94779 1100 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 RHOCP08134 193 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 FAM228BP0C875 321 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 NDUFV2P19404 249 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 HNRNPH3P31942 346 aaKnown RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 NNMTP40261 264 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 NUMBP49757 651 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ADKP55263 362 aaKnown RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 ECT2LQ008S8 904 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ENPP2Q13822 863 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 PTPRNQ16849 979 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ALFQ53S48 1182 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 LAIR1Q6GTX8 287 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 RWDD4Q6NW29 188 aaKnown RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 ALKBH5Q6P6C2 394 aaKnown RBP16.4■□□□□ 0.22
LIME1-209ENST00000494776 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 KBTBD6Q86V97 674 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 C11orf74Q86VG3 221 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 CCDC185Q8N715 623 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ZNF366Q8N895 744 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 RLN3Q8WXF3 142 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 DNAJC7Q99615 494 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 SUN2Q9UH99 717 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 VPS28Q9UK41 221 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 ERVW-1Q9UQF0 538 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
LIME1-209ENST00000494776 RNF8O76064 485 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 RHOBTB1O94844 696 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
LIME1-209ENST00000494776 OR1E1P30953 314 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 CTSOP43234 321 aaPredicted RBP16.39■□□□□ 0.21
LIME1-209ENST00000494776 OGDHQ02218 1023 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 ELF2Q15723 593 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 C6orf118Q5T5N4 469 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 CXorf57Q6NSI4 855 aaKnown RBP16.39■□□□□ 0.21
LIME1-209ENST00000494776 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 ZNF683Q8IZ20 524 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 FAM160A2Q8N612 972 aaPredicted RBP16.39■□□□□ 0.21
LIME1-209ENST00000494776 NTAN1Q96AB6 310 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 MRGPRX1Q96LB2 322 aa16.39■□□□□ 0.21
LIME1-209ENST00000494776 OSBPL2Q9H1P3 480 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms