RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RITA1Q96K30 269 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
SMC4-224ENST00000494612 PIGSQ96S52 555 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 TWSG1Q9GZX9 223 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 NUAK2Q9H093 628 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 NRIP3Q9NQ35 241 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 RXFP3Q9NSD7 469 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMC4-224ENST00000494612 COPG1Q9Y678 874 aaKnown RBP4.94□□□□□ -1.62
SMC4-224ENST00000494612 KAT6AQ92794 2004 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 POC1B-GALNT4F8VUJ3 575 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 H3BNC9 293 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 WDHD1O75717 1129 aaPredicted RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 TOP3BO95985 862 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 CYP3A4P08684 503 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 ALDOCP09972 364 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 ACP5P13686 325 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 CHN1P15882 459 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 CCT4P50991 539 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 TLE3Q04726 772 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 CDK18Q07002 472 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 TDGQ13569 410 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 DCTN1Q14203 1278 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 SLC39A5Q6ZMH5 540 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 TFAP2DQ7Z6R9 452 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 HEATR4Q86WZ0 1026 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 LAS2Q8IYD9 372 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 GALNT4Q8N4A0 578 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 CELF1Q92879 486 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 USP13Q92995 863 aaPredicted RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 SDCCAG3Q96C92 435 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 KTI12Q96EK9 354 aaPredicted RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 NAP1L4Q99733 375 aaKnown RBP4.93□□□□□ -1.62
SMC4-224ENST00000494612 SH2D3AQ9BRG2 576 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 EFHD1Q9BUP0 239 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 HDHD5Q9BXW7 423 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 NOD2Q9HC29 1040 aa4.93□□□□□ -1.62
SMC4-224ENST00000494612 MBD3L5A6NJ08 208 aaPredicted RBP4.92□□□□□ -1.62
SMC4-224ENST00000494612 PRRT4C9JH25 899 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 TMEM232C9JQI7 657 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 UBE2Q2LH0YL09 131 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 PPEF2O14830 753 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 KLK10O43240 276 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 NTN1O95631 604 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 TUBB4AP04350 444 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 TKTP29401 623 aaKnown RBP4.92□□□□□ -1.62
SMC4-224ENST00000494612 HOXD12P35452 270 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 IDUAP35475 653 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 FOXG1P55316 489 aaPredicted RBP4.92□□□□□ -1.62
SMC4-224ENST00000494612 UBE3AQ05086 875 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 G3BP1Q13283 466 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC4-224ENST00000494612 SEC23BQ15437 767 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ARL13AQ5H913 290 aaPredicted RBP4.92□□□□□ -1.62
SMC4-224ENST00000494612 RUSC1-AS1Q66K80 236 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 CCDC70Q6NSX1 233 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ANKS1BQ7Z6G8 1248 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ESX1Q8N693 406 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ANKRD44Q8N8A2 993 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 DENND1AQ8TEH3 1009 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 HVCN1Q96D96 273 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 HIC2Q96JB3 615 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ASB2Q96Q27 587 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 TWNKQ96RR1 684 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 TRIM2Q9C040 744 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 ACAD9Q9H845 621 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 MTMR4Q9NYA4 1195 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 SLC25A13Q9UJS0 675 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 LMTK3Q96Q04 1460 aa4.92□□□□□ -1.62
SMC4-224ENST00000494612 CYP3A7-CYP3A51PA0A087WV96 503 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 BTBD19C9JJ37 291 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 H7C1Q1 480 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 PEX12O00623 359 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 RRHO14718 337 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 SEPT4O43236 478 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 HNRNPRO43390 633 aaKnown RBP4.91□□□□□ -1.62
SMC4-224ENST00000494612 CYP2A6P11509 494 aaPredicted RBP4.91□□□□□ -1.62
SMC4-224ENST00000494612 ST6GAL1P15907 406 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 CYP3A7P24462 503 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 CDK7P50613 346 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 ZNF84P51523 738 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 CCR5P51681 352 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 YPEL5P62699 121 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 B4GALNT1Q00973 533 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 MTA1Q13330 715 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 CERKLQ49MI3 558 aaPredicted RBP4.91□□□□□ -1.62
SMC4-224ENST00000494612 CTXN3Q4LDR2 81 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 ZNF517Q6ZMY9 492 aaPredicted RBP4.91□□□□□ -1.62
SMC4-224ENST00000494612 RNF144BQ7Z419 303 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 RHPN2Q8IUC4 686 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 TMTC1Q8IUR5 882 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 ADGRF3Q8IZF5 1079 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 PTGR2Q8N8N7 351 aaPredicted RBP4.91□□□□□ -1.62
SMC4-224ENST00000494612 HERVK_113Q902F9 699 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 C5orf34Q96MH7 638 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 REEP2Q9BRK0 252 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 WACQ9BTA9 647 aa4.91□□□□□ -1.62
SMC4-224ENST00000494612 HTATIP2Q9BUP3 242 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms