RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 DCTN1Q14203 1278 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 SEMA3AQ14563 771 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-216ENST00000493758 LEXMQ3ZCV2 418 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 GALNTL6Q49A17 601 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 TTC39AQ5SRH9 613 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 VWA5B1Q5TIE3 1220 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 AWAT2Q6E213 333 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 TECPR1Q7Z6L1 1165 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 GLCCI1Q86VQ1 547 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 SDCCAG3Q96C92 435 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 G6PC2Q9NQR9 355 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 DTX4Q9Y2E6 619 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 COMMD10Q9Y6G5 202 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 LMTK3Q96Q04 1460 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 SPTLC2O15270 562 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 CYP19A1P11511 503 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-216ENST00000493758 SERPINA4P29622 427 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 CCT4P50991 539 aaKnown RBP4.78□□□□□ -1.64
ITGB1-216ENST00000493758 RCAN1P53805 252 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 TUBB8Q3ZCM7 444 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 KDELC2Q7Z4H8 507 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 IRF2BP2Q7Z5L9 587 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 ADGRF4Q8IZF3 695 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 CLEC4CQ8WTT0 213 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 TRAPPC12Q8WVT3 735 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 THAP4Q8WY91 577 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 LTV1Q96GA3 475 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-216ENST00000493758 RPS6KC1Q96S38 1066 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 PIGSQ96S52 555 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 TWSG1Q9GZX9 223 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 TASP1Q9H6P5 420 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 RNF146Q9NTX7 359 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 POT1Q9NUX5 634 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 LRFN1Q9P244 771 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 SLC8A2Q9UPR5 921 aa4.78□□□□□ -1.64
ITGB1-216ENST00000493758 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 FAM90A20PA6NIJ5 464 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 RHODO00212 210 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 UGDHO60701 494 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 FAM155BO75949 473 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 TFRCP02786 760 aaKnown RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 GYS1P13807 737 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 PCP4P48539 62 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 RHAGQ02094 409 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 SMAD1Q15797 465 aaKnown RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 SMTNL2Q2TAL5 461 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 C10orf76Q5T2E6 689 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 SULT6B1Q6IMI4 303 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 PTGR2Q8N8N7 351 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 ZNF548Q8NEK5 533 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 SORBS1Q9BX66 1292 aaKnown RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 OSBPL5Q9H0X9 879 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 FOXP1Q9H334 677 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 ELAC1Q9H777 363 aaKnown RBP4.77□□□□□ -1.65
ITGB1-216ENST00000493758 SAYSD1Q9NPB0 183 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 DECR2Q9NUI1 292 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 GRHPRQ9UBQ7 328 aa4.77□□□□□ -1.65
ITGB1-216ENST00000493758 MYMKA6NI61 221 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 H0Y3Z8 333 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 MDM4O15151 490 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 NEURL1O76050 574 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 IFNA2P01563 188 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 CYP21A2P08686 494 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 PSG1P11464 419 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 HOXB9P17482 250 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-216ENST00000493758 GRK6P43250 576 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 KRTAP1-1Q07627 177 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 OS9Q13438 667 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-216ENST00000493758 FAM83BQ5T0W9 1011 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 GGT6Q6P531 493 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 C9orf47Q6ZRZ4 202 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 TRAPPC11Q7Z392 1133 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 KLBQ86Z14 1044 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 ZNF366Q8N895 744 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 VPS37AQ8NEZ2 397 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 KAT2AQ92830 837 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 FZD3Q9NPG1 666 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 RASSF1Q9NS23 344 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 SRP68Q9UHB9 627 aaKnown RBP4.76□□□□□ -1.65
ITGB1-216ENST00000493758 LAMP3Q9UQV4 416 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 TNFSF13BQ9Y275 285 aa4.76□□□□□ -1.65
ITGB1-216ENST00000493758 hCG_1642624A0A1W2PR95 340 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 DPPA5A6NC42 116 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 GRM8O00222 908 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 IPO5O00410 1097 aaKnown RBP4.75□□□□□ -1.65
ITGB1-216ENST00000493758 PRPH2P23942 346 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 OAZ1P54368 228 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 FOXG1P55316 489 aaPredicted RBP4.75□□□□□ -1.65
ITGB1-216ENST00000493758 RNASELQ05823 741 aaKnown RBP4.75□□□□□ -1.65
ITGB1-216ENST00000493758 BIRC2Q13490 618 aa4.75□□□□□ -1.65
ITGB1-216ENST00000493758 PDCD2Q16342 344 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms