RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 UNKQ9C0B0 810 aaKnown RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 PCDHAC1Q9H158 963 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 ZMYND8Q9ULU4 1186 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 PCDHB7Q9Y5E2 793 aa4.69□□□□□ -1.66
SMC4-223ENST00000493695 FRMPD2Q68DX3 1309 aaPredicted RBP4.69□□□□□ -1.66
SMC4-223ENST00000493695 RHPN2P1A8MT19 583 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 VSTM5A8MXK1 200 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 M0QZQ0 153 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 LIASO43766 372 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 ZBED1O96006 694 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 GNALP38405 381 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 SHC2P98077 582 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 EEF1A2Q05639 463 aaKnown RBP4.68□□□□□ -1.66
SMC4-223ENST00000493695 Q0VFX4 171 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 COASYQ13057 564 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 TRAF1Q13077 416 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 DAG1Q14118 895 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 SLC39A14Q15043 492 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 FJX1Q86VR8 437 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 CAMK1DQ8IU85 385 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 WDR75Q8IWA0 830 aaKnown RBP4.68□□□□□ -1.66
SMC4-223ENST00000493695 FAM217AQ8IXS0 508 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 ADAD1Q96M93 576 aaKnown RBP4.68□□□□□ -1.66
SMC4-223ENST00000493695 PCGF6Q9BYE7 350 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 NUP62CLQ9H1M0 184 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 PRDM11Q9NQV5 511 aa4.68□□□□□ -1.66
SMC4-223ENST00000493695 PLEKHB1Q9UF11 243 aaPredicted RBP4.68□□□□□ -1.66
SMC4-223ENST00000493695 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ABATP80404 500 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 GRM3Q14832 879 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ZNF718Q3SXZ3 478 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ATG9BQ674R7 924 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 RAP1GAP2Q684P5 730 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ANKRD40Q6AI12 368 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 KDELC2Q7Z4H8 507 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ATP11CQ8NB49 1132 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 ADAMTS14Q8WXS8 1223 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 RTP4Q96DX8 246 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 FAR2Q96K12 515 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.67□□□□□ -1.66
SMC4-223ENST00000493695 OSBPL5Q9H0X9 879 aaPredicted RBP4.67□□□□□ -1.66
SMC4-223ENST00000493695 ZNF556Q9HAH1 456 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 TCF7L2Q9NQB0 619 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 DDX21Q9NR30 783 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMC4-223ENST00000493695 RXFP3Q9NSD7 469 aa4.67□□□□□ -1.66
SMC4-223ENST00000493695 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
SMC4-223ENST00000493695 KIF26BQ2KJY2 2108 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 SAC3D1A6NKF1 404 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 NPC1O15118 1278 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 KAT7O95251 611 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 GLUD1P00367 558 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 LCATP04180 440 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 ALDOCP09972 364 aaKnown RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 FCGR1AP12314 374 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 MYL4P12829 197 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 TCEA1P23193 301 aaKnown RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 SLC5A2P31639 672 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 RFX5P48382 616 aaPredicted RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 GLUD2P49448 558 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 RASSF2P50749 326 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 PMS2P54278 862 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 ATP1A4Q13733 1029 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 PLCB4Q15147 1175 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 HLFQ16534 295 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 ARL13AQ5H913 290 aaPredicted RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 C9orf57Q5W0N0 161 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 H1FNTQ75WM6 255 aaPredicted RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 C16orf82Q7Z2V1 217 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 ARMC9Q7Z3E5 817 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 CCDC25Q86WR0 208 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 PAQR4Q8N4S7 273 aaPredicted RBP4.66□□□□□ -1.66
SMC4-223ENST00000493695 IP6K1Q92551 441 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 C1QTNF4Q9BXJ3 329 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 BTBD1Q9H0C5 482 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 SFXN1Q9H9B4 322 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 FBXO4Q9UKT5 387 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 LMTK3Q96Q04 1460 aa4.66□□□□□ -1.66
SMC4-223ENST00000493695 AREL1O15033 823 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 PRC1O43663 620 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 CGAP01215 116 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 POLE2P56282 527 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 CCSAPQ6IQ19 270 aaPredicted RBP4.65□□□□□ -1.67
SMC4-223ENST00000493695 USP17L6PQ6QN14 398 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMC4-223ENST00000493695 SLC25A41Q8N5S1 370 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 OR14A16Q8NHC5 309 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 TMED6Q8WW62 240 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 NPIPB3Q92617 1050 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 SNX27Q96L92 541 aa4.65□□□□□ -1.67
SMC4-223ENST00000493695 A0A1B0GUV1 79 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 POM121BA6NF01 834 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 NEURL1O76050 574 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 PEPDP12955 493 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 TRIM27P14373 513 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 CHRNA5P30532 468 aa4.64□□□□□ -1.67
SMC4-223ENST00000493695 POU3F1Q03052 451 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms