RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 STIM2Q9P246 746 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 INTS6Q9UL03 887 aaKnown RBP18.32■□□□□ 0.52
NUP50-218ENST00000493456 CLCA2Q9UQC9 943 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 GOLGA6L7A0A1B0GV03 622 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 LATO43561 262 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 MAGEC1O60732 1142 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 MOCS3O95396 460 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 C5AR1P21730 350 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 TLE3Q04726 772 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D25Q3MII6 688 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 PITRM1Q5JRX3 1037 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 FOXD4L5Q5VV16 416 aaPredicted RBP18.31■□□□□ 0.52
NUP50-218ENST00000493456 NAPEPLDQ6IQ20 393 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 AADATQ8N5Z0 425 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 DCBLD1Q8N8Z6 715 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 MFSD2AQ8NA29 543 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 OR14C36Q8NHC7 312 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 FOXD4L4Q8WXT5 416 aaPredicted RBP18.31■□□□□ 0.52
NUP50-218ENST00000493456 KIAA1257Q9ULG3 409 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 ERVW-1Q9UQF0 538 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 MAST4O15021 2626 aa18.31■□□□□ 0.52
NUP50-218ENST00000493456 ERVH48-1M5A8F1 160 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 WNT9AO14904 365 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 F13A1P00488 732 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
NUP50-218ENST00000493456 VDRP11473 427 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 LCP1P13796 627 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 CD19P15391 556 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 PFKFB1P16118 471 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 GLDCP23378 1020 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 ACP1P24666 158 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 NUDT1P36639 197 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 PSMD8P48556 350 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 TBX4P57082 545 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 OVGP1Q12889 678 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 BNIP3Q12983 259 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 CUL2Q13617 745 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 ZCWPW2Q504Y3 356 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 RNF219Q5W0B1 726 aaPredicted RBP18.3■□□□□ 0.52
NUP50-218ENST00000493456 NADSYN1Q6IA69 706 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 KANSL1Q7Z3B3 1105 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 IQCHQ86VS3 1027 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 ERICH1Q86X53 443 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 CARNMT1Q8N4J0 409 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 UBA3Q8TBC4 463 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 KDM4CQ9H3R0 1056 aa18.3■□□□□ 0.52
NUP50-218ENST00000493456 MYLKQ15746 1914 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 TTC34A8MYJ7 566 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 O00370 1275 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 LTFP02788 710 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 EPB41P11171 864 aaKnown RBP18.29■□□□□ 0.52
NUP50-218ENST00000493456 CXADRP78310 365 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 ECT2LQ008S8 904 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 E2F1Q01094 437 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 INSM1Q01101 510 aaPredicted RBP18.29■□□□□ 0.52
NUP50-218ENST00000493456 CFHR1Q03591 330 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 NNTQ13423 1086 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 ELAVL3Q14576 367 aaKnown RBP18.29■□□□□ 0.52
NUP50-218ENST00000493456 PKDCCQ504Y2 493 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 PRPF39Q86UA1 669 aaKnown RBP18.29■□□□□ 0.52
NUP50-218ENST00000493456 SPACA3Q8IXA5 215 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 FAM129BQ96TA1 746 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 MAPK8IP1Q9UQF2 711 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 CEP83Q9Y592 693 aa18.29■□□□□ 0.52
NUP50-218ENST00000493456 NYNRINQ9P2P1 1898 aaKnown RBP18.29■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3DA0A087WVF3 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3IA0A087WXS9 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3EA0A087X179 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3KA0A087X1G2 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 A0A1B0GVL5 298 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3FA6NER0 549 aaPredicted RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3LB9A6J9 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 LUC7L3O95232 432 aaKnown RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3HP0C7X1 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 CMA1P23946 247 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 MZF1P28698 734 aaPredicted RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 PPP2CBP62714 309 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 RPS24P62847 133 aaKnown RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 PPP2CAP67775 309 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 PROX2Q3B8N5 592 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 MS4A13Q5J8X5 152 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3GQ6DHY5 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3CQ6IPX1 549 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 SPATS2Q86XZ4 545 aaKnown RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 TBC1D3Q8IZP1 549 aaPredicted RBP18.28■□□□□ 0.52
NUP50-218ENST00000493456 ZNF248Q8NDW4 579 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 FAM131CQ96AQ9 280 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 EEF2KMTQ96G04 330 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 SERPINB11Q96P15 392 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 DMTF1Q9Y222 760 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 HPSEQ9Y251 543 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 COQ4Q9Y3A0 265 aa18.28■□□□□ 0.52
NUP50-218ENST00000493456 SLC7A4O43246 635 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 FBXO21O94952 628 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 IL1BP01584 269 aa18.27■□□□□ 0.52
NUP50-218ENST00000493456 CTSOP43234 321 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms