RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 SLC22A12Q96S37 553 aa8.27□□□□□ -1.09
FDPS-218ENST00000492887 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
FDPS-218ENST00000492887 PRDM12Q9H4Q4 367 aa8.27□□□□□ -1.09
FDPS-218ENST00000492887 TASP1Q9H6P5 420 aa8.27□□□□□ -1.09
FDPS-218ENST00000492887 CLDND1Q9NY35 253 aa8.27□□□□□ -1.09
FDPS-218ENST00000492887 KLHL8Q9P2G9 620 aaPredicted RBP8.27□□□□□ -1.09
FDPS-218ENST00000492887 MTRF1LQ9UGC7 380 aaKnown RBP8.27□□□□□ -1.09
FDPS-218ENST00000492887 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.09
FDPS-218ENST00000492887 ZNF510Q9Y2H8 683 aa8.27□□□□□ -1.09
FDPS-218ENST00000492887 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 F5H423 210 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 H0Y626 953 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 I6L893 689 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 LEFTY2O00292 366 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 TBL1XO60907 577 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CNTN5O94779 1100 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CYBBP04839 570 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 ITGAVP06756 1048 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 ZSCAN5DPP0CG00 497 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 ETS1P14921 441 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 RHOQP17081 205 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 FSHRP23945 695 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 OR1E1P30953 314 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CCR2P41597 374 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 PTGIRP43119 386 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 HCAR3P49019 387 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 NUMBP49757 651 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 EMP3P54852 163 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 SLC7A9P82251 487 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 NRG1Q02297 640 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 GPS1Q13098 491 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 SEMA3BQ13214 749 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 XRCC4Q13426 336 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 EIF4EBP2Q13542 120 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 CUL1Q13616 776 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 PAFAH1B3Q15102 231 aaKnown RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 OASLQ15646 514 aaKnown RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 SLC5A9Q2M3M2 681 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 SLC45A4Q5BKX6 768 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 NADSYN1Q6IA69 706 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 TIGD7Q6NT04 549 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 CES5AQ6NT32 575 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 DRICH1Q6PGQ1 229 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 ARHGEF18Q6ZSZ5 1173 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 PRUNE1Q86TP1 453 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CCDC25Q86WR0 208 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CCDC13Q8IYE1 715 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 CARNMT1Q8N4J0 409 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 FAM71DQ8N9W8 422 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 SLC35B2Q8TB61 432 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 SH3RF2Q8TEC5 729 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 BHMTQ93088 406 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 NKD2Q969F2 451 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 IGSF8Q969P0 613 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 C1orf74Q96LT6 269 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 FAM161BQ96MY7 647 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 GAS2L1Q99501 681 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 ERP44Q9BS26 406 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 LRRC3Q9BY71 257 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 PCDH9Q9HC56 1237 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 DTLQ9NZJ0 730 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 PAK5Q9P286 719 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 AGO1Q9UL18 857 aaKnown RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 NFU1Q9UMS0 254 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 DRG1Q9Y295 367 aaKnown RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 RAD54BQ9Y620 910 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 ZFP37Q9Y6Q3 630 aaPredicted RBP8.26□□□□□ -1.09
FDPS-218ENST00000492887 ATG2BQ96BY7 2078 aa8.26□□□□□ -1.09
FDPS-218ENST00000492887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 CCDC151A5D8V7 595 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 E7EVH7 732 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 DNALI1O14645 258 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 NCAM2O15394 837 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 LINC01565O15544 149 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 RAMP2O60895 175 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 ZNF189O75820 626 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 LATS1O95835 1130 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 OLFM2O95897 454 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 PYGBP11216 843 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 VAV1P15498 845 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 HOXC13P31276 330 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 SLC6A4P31645 630 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 RPL21P46778 160 aaKnown RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 IFNAR2P48551 515 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 CARSP49589 748 aaKnown RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 ITGA8P53708 1063 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 EPHA5P54756 1037 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 PLTPP55058 493 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 GDF10P55107 478 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 MLLT6P55198 1093 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 CDH4P55283 916 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 HYAL1Q12794 435 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 SLC10A2Q12908 348 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 ZNF177Q13360 481 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 CDH18Q13634 790 aa8.25□□□□□ -1.09
FDPS-218ENST00000492887 POLD3Q15054 466 aaPredicted RBP8.25□□□□□ -1.09
FDPS-218ENST00000492887 P3H1Q32P28 736 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms