RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 DRGXA6NNA5 263 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 E9PAM4 449 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 SYNCRIPO60506 623 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNF217O75362 1048 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 FTLP02792 175 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 EPHX1P07099 455 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 SRPRAP08240 638 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 HNRNPH3P31942 346 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 GGCXP38435 758 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CSKP41240 450 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 PLK1P53350 603 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 AIF1P55008 147 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 HDAC4P56524 1084 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ST8SIA6P61647 398 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 NRG1Q02297 640 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 SULT2A1Q06520 285 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNF177Q13360 481 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 MAMLD1Q13495 774 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 PTPRNQ16849 979 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 PLEKHG6Q3KR16 790 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 FNDC3BQ53EP0 1204 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 FSCBQ5H9T9 825 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 PITRM1Q5JRX3 1037 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CXorf57Q6NSI4 855 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 KIAA1211LQ6NV74 962 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 C14orf80Q86SX3 495 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CIR1Q86X95 450 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 DRC7Q8IY82 874 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNF683Q8IZ20 524 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 SORCS1Q8WY21 1168 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 LOXL4Q96JB6 756 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 HINFPQ9BQA5 517 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CNPY3Q9BT09 278 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 ISCUQ9H1K1 167 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 TMEM245Q9H330 911 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 FBRSQ9HAH7 460 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 PPARGC1AQ9UBK2 798 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 INTS6Q9UL03 887 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
CDC42SE1-206ENST00000492796 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 WASH3PC4AMC7 463 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 CCP110O43303 1012 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 LRP3O75074 770 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 RHOBTB1O94844 696 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 RETP07949 1114 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 NDUFV2P19404 249 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 PRKCHP24723 683 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ADRA1BP35368 520 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 P2RY2P41231 377 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 IRAK1P51617 712 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 RPL7AP62424 266 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 SCAPQ12770 1279 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 CAMK2GQ13555 558 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ELF2Q15723 593 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 C6orf118Q5T5N4 469 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 SH3PXD2AQ5TCZ1 1133 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 RNF219Q5W0B1 726 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 FNIP1Q8TF40 1166 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNF653Q96CK0 615 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 MRGPRX1Q96LB2 322 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 DNAJC7Q99615 494 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZYG11BQ9C0D3 744 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 OSBPL2Q9H1P3 480 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 MRPL47Q9HD33 250 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 TMPRSS4Q9NRS4 437 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 CNOT8Q9UFF9 292 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 SUN2Q9UH99 717 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ADAMTS1Q9UHI8 967 aa10.97□□□□□ -0.65
CDC42SE1-206ENST00000492796 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 EPN2O95208 641 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PLEKP08567 350 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 C7P10643 843 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 HLA-EP13747 358 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PSMA2P25787 234 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 NNMTP40261 264 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 COPAP53621 1224 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ECT2LQ008S8 904 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 LPAL2Q16609 132 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PLK5Q496M5 336 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 RAB6CQ53S08 254 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ALFQ53S48 1182 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 EFHC2Q5JST6 749 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 MANEALQ5VSG8 457 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
CDC42SE1-206ENST00000492796 ZNF783Q6ZMS7 281 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms