RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 KLF10Q13118 480 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TIGD7Q6NT04 549 aaPredicted RBP21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 GLMNQ92990 594 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SLC10A4Q96EP9 437 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TRIM54Q9BYV2 358 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 POMKQ9H5K3 350 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SLC38A7Q9NVC3 462 aa21.51■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 EME2A4GXA9 379 aaPredicted RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 LRCH4O75427 683 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 LRPAP1P30533 357 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MSLNQ13421 630 aaPredicted RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 FRG1Q14331 258 aaKnown RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PTPN20Q4JDL3 420 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ZC3H12AQ5D1E8 599 aaKnown RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 P3H2Q8IVL5 708 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 OR52K1Q8NGK4 314 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TJP2Q9UDY2 1190 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 GOLGA8TH3BQL2 631 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 BAIAP3O94812 1187 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 VAPBO95292 243 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TNFSF9P41273 254 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 DMC1Q14565 340 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PSTKQ8IV42 348 aaKnown RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MARK4Q96L34 752 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 LHX5Q9H2C1 402 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 COG4Q9H9E3 785 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ERI2A8K979 691 aaKnown RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MYO1DO94832 1006 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 HOXD13P35453 343 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 USP4Q13107 963 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SHROOM1Q2M3G4 852 aaPredicted RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TNS4Q8IZW8 715 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TIMMDC1Q9NPL8 285 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CYLDQ9NQC7 956 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SNX15Q9NRS6 342 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 DNAJC28Q9NX36 388 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 DNAJB4Q9UDY4 337 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MAP3K13O43283 966 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TGFB3P10600 412 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 XPAP23025 273 aaPredicted RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CYP51A1Q16850 503 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ADGRF2Q8IZF7 708 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 DEFB106AQ8N104 65 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 FNIP1Q8TF40 1166 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SEPHS2Q99611 448 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ACE2Q9BYF1 805 aaPredicted RBP21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CASS4Q9NQ75 786 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 GALNT8Q9NY28 637 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 RAB26Q9ULW5 256 aa21.5■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 FKBP9O95302 570 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ATP6V1B2P21281 511 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 EPHA3P29320 983 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 OAZ1P54368 228 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 RAD51Q06609 339 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CDC16Q13042 620 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 FKBP9P1Q75LS8 142 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ACTR3P61158 418 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CNPY1Q3B7I2 92 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PRAMEF18Q5VWM3 479 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TRPC4APQ8TEL6 797 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 EBF3Q9H4W6 596 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MYH10P35580 1976 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CYB561D2O14569 222 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 GALNTL6Q49A17 601 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 OTUD3Q5T2D3 398 aaPredicted RBP21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PPP1R10Q96QC0 940 aaKnown RBP21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 KLK14Q9P0G3 267 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MYH2Q9UKX2 1941 aa21.49■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TRAF2Q12933 501 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 INSCQ1MX18 579 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 LENG9Q96B70 501 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 NSMCE2Q96MF7 247 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PCDHAC2Q9Y5I4 1007 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CFAP99D6REC4 459 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 VTNP04004 478 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 TM4SF1P30408 202 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 HORMAD1Q86X24 394 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 IL22Q9GZX6 179 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 DLGAP3O95886 979 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 EIF2B2P49770 351 aaKnown RBP21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 POU5F1Q01860 360 aaKnown RBP21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ENDOVQ8N8Q3 282 aaKnown RBP21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 RDH11Q8TC12 318 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 VAT1Q99536 393 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SPAG4Q9NPE6 437 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 KLRC2P26717 231 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PEX2P28328 305 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 CSE1LP55060 971 aaKnown RBP21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ATP6AP1LQ52LC2 224 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 ZNF470Q6ECI4 717 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 MIER2Q8N344 545 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 C7orf43Q8WVR3 580 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SPATA16Q9BXB7 569 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 PRKD2Q9BZL6 878 aa21.48■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 SQLEQ14534 574 aa21.47■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 FBXO47Q5MNV8 452 aa21.47■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 BSNDQ8WZ55 320 aa21.47■■□□□ 1.03
CHKB-CPT1B-203ENST00000492556 NFASCO94856 1347 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms