RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 MBD1Q9UIS9 605 aaPredicted RBP16.45■□□□□ 0.22
PKP4-214ENST00000492496 VANGL2Q9ULK5 521 aa16.45■□□□□ 0.22
PKP4-214ENST00000492496 USP18Q9UMW8 372 aa16.45■□□□□ 0.22
PKP4-214ENST00000492496 GVINP1Q7Z2Y8 2422 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 A0A1W2PQJ5 194 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 CLDN11O75508 207 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
PKP4-214ENST00000492496 C7P10643 843 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 COPAP53621 1224 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 ATXN1P54253 815 aaKnown RBP16.44■□□□□ 0.22
PKP4-214ENST00000492496 ST8SIA6P61647 398 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 ATP11AP98196 1134 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 LMNB2Q03252 620 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 PLEKHG6Q3KR16 790 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 CCDC14Q49A88 953 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 PLA2G2CQ5R387 149 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 KIAA1324Q6UXG2 1013 aaKnown RBP16.44■□□□□ 0.22
PKP4-214ENST00000492496 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 CIR1Q86X95 450 aaPredicted RBP16.44■□□□□ 0.22
PKP4-214ENST00000492496 JOSD2Q8TAC2 188 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 HAUS4Q9H6D7 363 aa16.44■□□□□ 0.22
PKP4-214ENST00000492496 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 TCRBV5S1A1TA0A578 114 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 DRGXA6NNA5 263 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 PRR5-ARHGAP8B1AHC4 643 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 AP5Z1O43299 807 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ZNF806P0C7X5 589 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 HLA-EP13747 358 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 CDH4P55283 916 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ARHGAP8P85298 464 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ZNF177Q13360 481 aaPredicted RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 CXorf57Q6NSI4 855 aaKnown RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 DNAJC24Q6P3W2 148 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 PRR23CQ6ZRP0 262 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 C14orf80Q86SX3 495 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 TMPRSS6Q8IU80 811 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ZNF683Q8IZ20 524 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 APCDD1Q8J025 514 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 FRMD1Q8N878 549 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 OR2T3Q8NH03 318 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 PRCCQ92733 491 aaPredicted RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 ERLEC1Q96DZ1 483 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 SIPA1Q96FS4 1042 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 MYO19Q96H55 970 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 MKRN2Q9H000 416 aaKnown RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 SLC6A17Q9H1V8 727 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 USP36Q9P275 1121 aaKnown RBP16.43■□□□□ 0.22
PKP4-214ENST00000492496 ERVW-1Q9UQF0 538 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
PKP4-214ENST00000492496 IGLV3-10A0A075B6K4 115 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 ANKRD62A6NC57 917 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 GJB6O95452 261 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 GZMAP12544 262 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 GPD1P21695 349 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 SDHBP21912 280 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 RFC1P35251 1148 aaPredicted RBP16.42■□□□□ 0.22
PKP4-214ENST00000492496 GGCXP38435 758 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 MPLP40238 635 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 DPP6P42658 865 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 CREB5Q02930 508 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 CDO1Q16878 200 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
PKP4-214ENST00000492496 E4F1Q66K89 784 aaPredicted RBP16.42■□□□□ 0.22
PKP4-214ENST00000492496 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 ZNF571Q7Z3V5 609 aaPredicted RBP16.42■□□□□ 0.22
PKP4-214ENST00000492496 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
PKP4-214ENST00000492496 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 VPS45Q9NRW7 570 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 CYP8B1Q9UNU6 501 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 TBC1D30Q9Y2I9 924 aa16.42■□□□□ 0.22
PKP4-214ENST00000492496 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 E9PAM4 449 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 IGLV3-19P01714 112 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 TPM3P06753 285 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 MZF1P28698 734 aaPredicted RBP16.41■□□□□ 0.22
PKP4-214ENST00000492496 OXTRP30559 389 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 ADRA1BP35368 520 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 DHPSP49366 369 aaPredicted RBP16.41■□□□□ 0.22
PKP4-214ENST00000492496 IRAK1P51617 712 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 ZBED6P86452 979 aa16.41■□□□□ 0.22
PKP4-214ENST00000492496 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
PKP4-214ENST00000492496 RPL6Q02878 288 aaKnown RBP16.41■□□□□ 0.22
PKP4-214ENST00000492496 PPP1R15BQ5SWA1 713 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms