RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ECT2LQ008S8 904 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 FOXC1Q12948 553 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 MAN2A1Q16706 1144 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 HLA-BQ31612 363 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CT47A1Q5JQC4 288 aaPredicted RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 TTC39BQ5VTQ0 682 aaPredicted RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF776Q68DI1 518 aaPredicted RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 OLFML1Q6UWY5 402 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 UNQ6494/PRO21346Q6UXR6 183 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 BNIPLQ7Z465 357 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 APCDD1Q8J025 514 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CFAP52Q8N1V2 620 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ZCCHC9Q8N567 271 aaKnown RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF366Q8N895 744 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 FRS2Q8WU20 508 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ADAMTS14Q8WXS8 1223 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 PTPRN2Q92932 1015 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM149B1Q96BN6 582 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 PPP1R13BQ96KQ4 1090 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 NAA15Q9BXJ9 866 aaKnown RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 BTBD1Q9H0C5 482 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 MTG2Q9H4K7 406 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 TMEM51Q9NW97 253 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 SLCO3A1Q9UIG8 710 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 PCOLCE2Q9UKZ9 415 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 FZD4Q9ULV1 537 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 TBC1D30Q9Y2I9 924 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 OR51B4Q9Y5P0 310 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 PLXNA2O75051 1894 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SPEGQ15772 3267 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 APC2O95996 2303 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 EDDM13A0A1B0GTR0 161 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TTC34A8MYJ7 566 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CAPN9O14815 690 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 PCDHGA12O60330 932 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SIN3BO75182 1162 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CER1O95813 267 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 APOEP02649 317 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 DNTTP04053 509 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 ERBB2P04626 1255 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SPINK2P20155 84 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CCR1P32246 355 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SCNN1AP37088 669 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CTSKP43235 329 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 GABRB2P47870 512 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CSNK1EP49674 416 aaKnown RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CCR5P51681 352 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 GALCP54803 685 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 OXCT1P55809 520 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CDK17Q00537 523 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC6A3Q01959 620 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 PTK2Q05397 1052 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SULT2A1Q06520 285 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 KCNMA1Q12791 1236 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CDH18Q13634 790 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 KCNJ12Q14500 433 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TRIP6Q15654 476 aaKnown RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CST6Q15828 149 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 KIF19Q2TAC6 998 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TTC31Q49AM3 519 aaPredicted RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 PTPN20Q4JDL3 420 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 KCNT1Q5JUK3 1230 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 OTUD1Q5VV17 481 aaPredicted RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 RAP1GAP2Q684P5 730 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 KIAA0895LQ68EN5 471 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 FBXL22Q6P050 247 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 C11orf57Q6ZUT1 292 aaPredicted RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 ARCQ7LC44 396 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM124AQ86V42 546 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC47A2Q86VL8 602 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 ZDHHC17Q8IUH5 632 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 NAXDQ8IW45 347 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF683Q8IZ20 524 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 LGI2Q8N0V4 545 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 DEFB106AQ8N104 65 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CARNMT1Q8N4J0 409 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 C1orf131Q8NDD1 294 aaKnown RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 PGAP3Q96FM1 320 aaPredicted RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CAMK1GQ96NX5 476 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 NPY6RQ99463 290 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 FEM1AQ9BSK4 669 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 NDST4Q9H3R1 872 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 GAREM1Q9H706 876 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 EBF2Q9HAK2 575 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 IL21RQ9HBE5 538 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TM9SF3Q9HD45 589 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TOR4AQ9NXH8 423 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 CHMP5Q9NZZ3 219 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 STIM2Q9P246 746 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 SERGEFQ9UGK8 458 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 DNAJC12Q9UKB3 198 aa8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 TPX2Q9ULW0 747 aaKnown RBP8.65□□□□□ -1.02
SMARCB1-207ENST00000491967 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms