RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CHN1P15882 459 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 CERS1P27544 350 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 IDUAP35475 653 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 PNPLA4P41247 253 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 YPEL5P62699 121 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 B4GALNT1Q00973 533 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 CDK18Q07002 472 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 DCTN1Q14203 1278 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 SEC23BQ15437 767 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 RUNDC3AQ59EK9 446 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 ZNF484Q5JVG2 852 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 ANO7Q6IWH7 933 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 KIAA1324Q6UXG2 1013 aaKnown RBP4.34□□□□□ -1.71
VTA1-204ENST00000491881 RBM44Q6ZP01 1051 aaKnown RBP4.34□□□□□ -1.71
VTA1-204ENST00000491881 RASGRP2Q7LDG7 609 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 TFAP2DQ7Z6R9 452 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 LRRTM4Q86VH4 590 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 RFX6Q8HWS3 928 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 ENDOVQ8N8Q3 282 aaKnown RBP4.34□□□□□ -1.71
VTA1-204ENST00000491881 KCNJ9Q92806 393 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 RMI1Q9H9A7 625 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 ERVK-5Q9HDB9 667 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 IPO11Q9UI26 975 aaKnown RBP4.34□□□□□ -1.71
VTA1-204ENST00000491881 RCE1Q9Y256 329 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 LRRFIP2Q9Y608 721 aaKnown RBP4.34□□□□□ -1.71
VTA1-204ENST00000491881 SPATA31A5Q5VU36 1347 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 EMSYQ7Z589 1322 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 SPATA31A7Q8IWB4 1347 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 WDR17Q8IZU2 1322 aa4.34□□□□□ -1.71
VTA1-204ENST00000491881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.33□□□□□ -1.72
VTA1-204ENST00000491881 RRHO14718 337 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 NCAM2O15394 837 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 KCNAB3O43448 404 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 BMP15O95972 392 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 PLAUP00749 431 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 CD63P08962 238 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 RFPL3SP0C7P2 107 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 CKMT1AP12532 417 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ST6GAL1P15907 406 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 CNTFP26441 200 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 UBE3AQ05086 875 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ALKBH1Q13686 389 aaKnown RBP4.33□□□□□ -1.72
VTA1-204ENST00000491881 LIPMQ5VYY2 423 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ZNF66Q6ZN08 573 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 RHPN2Q8IUC4 686 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ZNF398Q8TD17 642 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 MAP4K1Q92918 833 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 P2RY11Q96G91 374 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 NPAS1Q99742 590 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 TM2D2Q9BX73 214 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 TRIM31Q9BZY9 425 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ARHGAP39Q9C0H5 1083 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 PDGFCQ9NRA1 345 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.33□□□□□ -1.72
VTA1-204ENST00000491881 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 DNAJC16Q9Y2G8 782 aa4.33□□□□□ -1.72
VTA1-204ENST00000491881 ZNF804BA4D1E1 1349 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SAC3D1A6NKF1 404 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 MCIDASD6RGH6 385 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 CCNT1O60563 726 aaKnown RBP4.32□□□□□ -1.72
VTA1-204ENST00000491881 TSPAN3O60637 253 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SGPL1O95470 568 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 TUBB4AP04350 444 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 CSF1P09603 554 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 ACP5P13686 325 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 TNNT1P13805 278 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 CPA1P15085 419 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 RPS6KB1P23443 525 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 EPHB2P29323 1055 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 PTGER1P34995 402 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 OAZ1P54368 228 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SLC12A2P55011 1212 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
VTA1-204ENST00000491881 HSF1Q00613 529 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 THOC5Q13769 683 aaKnown RBP4.32□□□□□ -1.72
VTA1-204ENST00000491881 GXYLT1Q4G148 440 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 ALFQ53S48 1182 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 MTX3Q5HYI7 312 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 CEP78Q5JTW2 689 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 ZNF474Q6S9Z5 364 aaPredicted RBP4.32□□□□□ -1.72
VTA1-204ENST00000491881 CNGA4Q8IV77 575 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 FAM47BQ8NA70 645 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 USP38Q8NB14 1042 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 LINS1Q8NG48 757 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 ZFPM2Q8WW38 1151 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 WASF1Q92558 559 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 TWNKQ96RR1 684 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SEMA4CQ9C0C4 833 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 MTMR4Q9NYA4 1195 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 KLHL13Q9P2N7 655 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SUFUQ9UMX1 484 aa4.32□□□□□ -1.72
VTA1-204ENST00000491881 SLC22A23A1A5C7 686 aa4.31□□□□□ -1.72
VTA1-204ENST00000491881 PPP6CO00743 305 aa4.31□□□□□ -1.72
VTA1-204ENST00000491881 SYN3O14994 580 aa4.31□□□□□ -1.72
VTA1-204ENST00000491881 ANP32CO43423 234 aa4.31□□□□□ -1.72
VTA1-204ENST00000491881 PYGLP06737 847 aa4.31□□□□□ -1.72
VTA1-204ENST00000491881 CNPP09543 421 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms