RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 C18orf8Q96DM3 657 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 PRICKLE1Q96MT3 831 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 SCNM1Q9BWG6 230 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 GPR174Q9BXC1 333 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 DEF6Q9H4E7 631 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 OLA1Q9NTK5 396 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 IMPACTQ9P2X3 320 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 STOML2Q9UJZ1 356 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 HBS1LQ9Y450 684 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 PTPRBP23467 1997 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 PLXNB3Q9ULL4 1909 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 CAPN9O14815 690 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 GJB3O75712 270 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ADCY5O95622 1261 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 IGLV3-27P01718 113 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 FYNP06241 537 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 EPHX1P07099 455 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 MMEP08473 750 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 DESP17661 470 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 CD70P32970 193 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 PRKCIP41743 596 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 NSFP46459 744 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ATXN3P54252 364 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 BNC1Q01954 994 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 RING1Q06587 406 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 GRIK2Q13002 908 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 EIF4HQ15056 248 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 PTPRNQ16849 979 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 PLEKHG6Q3KR16 790 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 MPPE1Q53F39 396 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 FAM133BQ5BKY9 247 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 NADSYN1Q6IA69 706 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 OR6B2Q6IFH4 312 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 SERPINA13PQ6UXR4 307 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ADIPOR2Q86V24 386 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 C1orf131Q8NDD1 294 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ZCCHC14Q8WYQ9 949 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 TTYH3Q9C0H2 523 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 TMEM245Q9H330 911 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 MTG2Q9H4K7 406 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ITM2CQ9NQX7 267 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ABCC13Q9NSE7 274 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 ABCB8Q9NUT2 735 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 DNAAF2Q9NVR5 837 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 KLK13Q9UKR3 277 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 LHX6Q9UPM6 363 aa11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-211ENST00000491685 MEI4A8MW99 385 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 UPK3BL1B0FP48 263 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 UPK3BL2E5RIL1 263 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 SYNCRIPO60506 623 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 OPHN1O60890 802 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 IGLV3-19P01714 112 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 GYPCP04921 128 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 GLI1P08151 1106 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 GZMAP12544 262 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CDH5P33151 784 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 RPL34P49207 117 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 HARS2P49590 506 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 SIM1P81133 766 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CAMK2GQ13555 558 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 DCAF12L1Q5VU92 463 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 ACAD10Q6JQN1 1059 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 KIAA0907Q7Z7F0 614 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 PASD1Q8IV76 773 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 HDDC3Q8N4P3 179 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 WDTC1Q8N5D0 677 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CPA5Q8WXQ8 436 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 PRCCQ92733 491 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 SIPA1Q96FS4 1042 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 VCPIP1Q96JH7 1222 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 FCRL2Q96LA5 508 aaPredicted RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 SLC2A11Q9BYW1 496 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 IL21RQ9HBE5 538 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 GGA2Q9UJY4 613 aa11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 NOCTQ9UK39 431 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-211ENST00000491685 FREM2Q5SZK8 3169 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 LOC400499M0QZD8 3231 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 ANKRD62A6NC57 917 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 NRDCO43847 1150 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 SH3BP5O60239 455 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 TBL1XO60907 577 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 LATS1O95835 1130 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 LTFP02788 710 aa11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 CYP1A1P04798 512 aaPredicted RBP11.4□□□□□ -0.58
TMEM39A-211ENST00000491685 CALB1P05937 261 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms