RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 TMEM215Q68D42 235 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 MBLAC2Q68D91 279 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 SORCS1Q8WY21 1168 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 TBC1D31Q96DN5 1066 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 ELOVL2Q9NXB9 296 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 KIAA1522Q9P206 1035 aaPredicted RBP20.15■□□□□ 0.82
SEC22A-209ENST00000491366 HCN2Q9UL51 889 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 REXO2Q9Y3B8 237 aaKnown RBP20.15■□□□□ 0.82
SEC22A-209ENST00000491366 CHURC1-FNTBB4DL54 471 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 IL1R2P27930 398 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 GJC1P36383 396 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 NOP2P46087 812 aaKnown RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 CCR3P51677 355 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 SMTNL2Q2TAL5 461 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 KCNT1Q5JUK3 1230 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 ARTNQ5T4W7 220 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 MANEALQ5VSG8 457 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 CXorf57Q6NSI4 855 aaKnown RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 CYP4V2Q6ZWL3 525 aaPredicted RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 ADIPOR2Q86V24 386 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 IL17RCQ8NAC3 791 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 TXNDC5Q8NBS9 432 aaKnown RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 CYB5D2Q8WUJ1 264 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 UCMAQ8WVF2 138 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 HSPH1Q92598 858 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 ACDQ96AP0 544 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 LMLNQ96KR4 655 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 ACOX2Q99424 681 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 EPAS1Q99814 870 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 DESI2Q9BSY9 194 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 PPARGC1AQ9UBK2 798 aaKnown RBP20.14■□□□□ 0.81
SEC22A-209ENST00000491366 STARD13Q9Y3M8 1113 aa20.14■□□□□ 0.81
SEC22A-209ENST00000491366 MTA2O94776 668 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 MOCS3O95396 460 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 RHOCP08134 193 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 CHRM1P11229 460 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 POLR2EP19388 210 aaKnown RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 MZF1P28698 734 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 L1CAMP32004 1257 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 CXCL12P48061 93 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 NUBP1P53384 320 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 EIF4HQ15056 248 aaKnown RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 ANGPT1Q15389 498 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 PPP6R3Q5H9R7 873 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 PITRM1Q5JRX3 1037 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 RNF219Q5W0B1 726 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 TSSK4Q6SA08 328 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 KIAA0907Q7Z7F0 614 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 KIAA1328Q86T90 577 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 CHPFQ8IZ52 775 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 APCDD1Q8J025 514 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 OR52K2Q8NGK3 314 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 ERLEC1Q96DZ1 483 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 KCTD15Q96SI1 283 aaPredicted RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 MUC3BQ9H195 1237 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 CACNA2D2Q9NY47 1150 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 LCMT1Q9UIC8 334 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 INTS6Q9UL03 887 aaKnown RBP20.13■□□□□ 0.81
SEC22A-209ENST00000491366 SLC8A2Q9UPR5 921 aa20.13■□□□□ 0.81
SEC22A-209ENST00000491366 RCCD1A6NED2 376 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 SGK1O00141 431 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 TIMM44O43615 452 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 EPHB2P29323 1055 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 OR1E1P30953 314 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 OXCT1P55809 520 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 TPI1P60174 286 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 SLC25A11Q02978 314 aaKnown RBP20.12■□□□□ 0.81
SEC22A-209ENST00000491366 CSTF1Q05048 431 aaKnown RBP20.12■□□□□ 0.81
SEC22A-209ENST00000491366 DMC1Q14565 340 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 GSE1Q14687 1217 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 PLEKHG6Q3KR16 790 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 TXNRD3NBQ6F5E7 133 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 TRMT11Q7Z4G4 463 aaKnown RBP20.12■□□□□ 0.81
SEC22A-209ENST00000491366 KCNV2Q8TDN2 545 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.12■□□□□ 0.81
SEC22A-209ENST00000491366 MMP17Q9ULZ9 603 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 NEU3Q9UQ49 428 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 TBC1D30Q9Y2I9 924 aa20.12■□□□□ 0.81
SEC22A-209ENST00000491366 EEF2KO00418 725 aaKnown RBP20.11■□□□□ 0.81
SEC22A-209ENST00000491366 ADAM23O75077 832 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 ATP5BP06576 529 aaKnown RBP20.11■□□□□ 0.81
SEC22A-209ENST00000491366 RARAP10276 462 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 RHOQP17081 205 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 NTSR1P30989 418 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 HOXC13P31276 330 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 MAN1A1P33908 653 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 ARHGAP25P42331 645 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 VAV2P52735 878 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 KRT83P78385 493 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 SEMA3BQ13214 749 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 TCEAL1Q15170 157 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 HADHQ16836 314 aaKnown RBP20.11■□□□□ 0.81
SEC22A-209ENST00000491366 FNDC3BQ53EP0 1204 aaKnown RBP20.11■□□□□ 0.81
SEC22A-209ENST00000491366 BOLA3Q53S33 107 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 EOGTQ5NDL2 527 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 C6orf118Q5T5N4 469 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 SDE2Q6IQ49 451 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 SYT13Q7L8C5 426 aa20.11■□□□□ 0.81
SEC22A-209ENST00000491366 LRRC8AQ8IWT6 810 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms