RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 TTC34A8MYJ7 566 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 MID1O15344 667 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 GRIA4P48058 902 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 STK19P49842 368 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 EIF4EBP2Q13542 120 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 CST6Q15828 149 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 C9orf64Q5T6V5 341 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 USP30Q70CQ3 517 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 IRF2BP1Q8IU81 584 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 MMAAQ8IVH4 418 aaKnown RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 GANCQ8TET4 914 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 RPL10LQ96L21 214 aaKnown RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 PRMT1Q99873 361 aaKnown RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 ORAI3Q9BRQ5 295 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 FBXL12Q9NXK8 326 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 KIAA1522Q9P206 1035 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-220ENST00000491319 SNX11Q9Y5W9 270 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 PKD1L2Q7Z442 2459 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 EDDM13A0A1B0GTR0 161 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 A0A1W2PP55 124 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 FAM47DPA6NHR8 397 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 KCNU1A8MYU2 1149 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 F5H5T6 163 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 GRAP2O75791 330 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 MOCS3O95396 460 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 IGHV4-34P06331 123 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 SRPRAP08240 638 aaKnown RBP16.23■□□□□ 0.19
SMPD4-220ENST00000491319 CD27P26842 260 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 PON1P27169 355 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 UBE2HP62256 183 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 CENPCQ03188 943 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 ARID5BQ14865 1188 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 TEAD4Q15561 434 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 KCNT1Q5JUK3 1230 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 KIAA0895LQ68EN5 471 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 FAM183BPQ6ZVS7 135 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 GLRX5Q86SX6 157 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 DEFB106AQ8N104 65 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 CCAR2Q8N163 923 aaKnown RBP16.23■□□□□ 0.19
SMPD4-220ENST00000491319 ATP6V0D2Q8N8Y2 350 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 KDM1BQ8NB78 822 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 C1orf131Q8NDD1 294 aaKnown RBP16.23■□□□□ 0.19
SMPD4-220ENST00000491319 BAHD1Q8TBE0 780 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-220ENST00000491319 ADAMTS14Q8WXS8 1223 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 PPP1R13BQ96KQ4 1090 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 SLC2A13Q96QE2 648 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 SIX2Q9NPC8 291 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 OSGEPQ9NPF4 335 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 DDIT4Q9NX09 232 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 SLCO3A1Q9UIG8 710 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 SCML1Q9UN30 329 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 PCDHGC3Q9UN70 934 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 NCKAP1Q9Y2A7 1128 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 BTBD3Q9Y2F9 522 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 ANKRD6Q9Y2G4 727 aa16.23■□□□□ 0.19
SMPD4-220ENST00000491319 COL5A1P20908 1838 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 GTPBP10A4D1E9 387 aaKnown RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 FLRT2O43155 660 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 RNASEH1O60930 286 aaKnown RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 PDGFRAP16234 1089 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 MTIF2P46199 727 aaKnown RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 PSMD8P48556 350 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 ECT2LQ008S8 904 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 SLCO6A1Q86UG4 719 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 STK40Q8N2I9 435 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMPD4-220ENST00000491319 PCDHGB2Q9Y5G2 931 aa16.22■□□□□ 0.19
SMPD4-220ENST00000491319 DMXL2Q8TDJ6 3036 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 A0A1B0GVM2 712 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 TARSL2A2RTX5 802 aaKnown RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 TCAF2A6NFQ2 919 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 SRRM3A6NNA2 597 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 KCNK3O14649 394 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 HSF2BPO75031 334 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 RNASEH2AO75792 299 aaKnown RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 ERBB2P04626 1255 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 GLI1P08151 1106 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 VAV1P15498 845 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 ABCB4P21439 1286 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 MZF1P28698 734 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 CCR1P32246 355 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 GGCXP38435 758 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 IRAK1P51617 712 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 GALCP54803 685 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 CDK17Q00537 523 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 OR6B2Q6IFH4 312 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 CXorf57Q6NSI4 855 aaKnown RBP16.21■□□□□ 0.19
SMPD4-220ENST00000491319 OLFML1Q6UWY5 402 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 DBX2Q6ZNG2 339 aa16.21■□□□□ 0.19
SMPD4-220ENST00000491319 ADAT2Q7Z6V5 191 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms