RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 MZF1P28698 734 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 MATKP42679 507 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 NUMBP49757 651 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 IRAK1P51617 712 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 ECT2LQ008S8 904 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 AUHQ13825 339 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 KRT31Q15323 416 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 C9orf64Q5T6V5 341 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 CXorf57Q6NSI4 855 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 C14orf80Q86SX3 495 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 ZDHHC17Q8IUH5 632 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 DHX40Q8IX18 779 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 ZCCHC9Q8N567 271 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 C18orf8Q96DM3 657 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 MIR1-1HGQ9H1L0 117 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 ANLNQ9NQW6 1124 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 DNAAF2Q9NVR5 837 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 FANCLQ9NW38 375 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 EIF2B4Q9UI10 523 aaKnown RBP18.58■□□□□ 0.56
HMGN1-219ENST00000491183 HS3ST4Q9Y661 456 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 SLCO1B1Q9Y6L6 691 aa18.58■□□□□ 0.56
HMGN1-219ENST00000491183 CACNA1EQ15878 2313 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ITIH6Q6UXX5 1313 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 UPK3BL1B0FP48 263 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 UPK3BL2E5RIL1 263 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 F8VZ95 297 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 I6L893 689 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-219ENST00000491183 PAGE1O75459 146 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 GJB3O75712 270 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 MOCS3O95396 460 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 DNTTP04053 509 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 MMEP08473 750 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 CD59P13987 128 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 GGCXP38435 758 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 PLK1P53350 603 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 RNASE9P60153 205 aaKnown RBP18.57■□□□□ 0.56
HMGN1-219ENST00000491183 SHC2P98077 582 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 CENPCQ03188 943 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF252P-AS1Q0IIN9 211 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 C2CD6Q53TS8 623 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ZNF776Q68DI1 518 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ERICH1Q86X53 443 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 XYLT1Q86Y38 959 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 HDDC3Q8N4P3 179 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 OR52K2Q8NGK3 314 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 NT5C3BQ969T7 300 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ALG14Q96F25 216 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 RPL10LQ96L21 214 aaKnown RBP18.57■□□□□ 0.56
HMGN1-219ENST00000491183 GBP4Q96PP9 640 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 PCED1AQ9H1Q7 454 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 PIGVQ9NUD9 493 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.57■□□□□ 0.56
HMGN1-219ENST00000491183 ANGPTL2Q9UKU9 493 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 VANGL2Q9ULK5 521 aa18.57■□□□□ 0.56
HMGN1-219ENST00000491183 A0A1B0GVM2 712 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 TARSL2A2RTX5 802 aaKnown RBP18.56■□□□□ 0.56
HMGN1-219ENST00000491183 TCAF2A6NFQ2 919 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 EPHB6O15197 1021 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 OPHN1O60890 802 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 ADCY5O95622 1261 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 PDGFRAP16234 1089 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 CXCR3P49682 368 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 STK19P49842 368 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-219ENST00000491183 BNC1Q01954 994 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 GRIK2Q13002 908 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 SLC12A1Q13621 1099 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 C5orf22Q49AR2 442 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 RABGAP1LQ5R372 815 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 TTC39BQ5VTQ0 682 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-219ENST00000491183 EPS8L1Q8TE68 723 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 PTPRN2Q92932 1015 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 RPRD1AQ96P16 312 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-219ENST00000491183 FAM129BQ96TA1 746 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 BTBD1Q9H0C5 482 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 PABPC3Q9H361 631 aaKnown RBP18.56■□□□□ 0.56
HMGN1-219ENST00000491183 ARHGEF38Q9NXL2 777 aa18.56■□□□□ 0.56
HMGN1-219ENST00000491183 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SEMA4FO95754 770 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SCNN1AP37088 669 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SULT1E1P49888 294 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 NOMO3P69849 1222 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 MTA1Q13330 715 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 TRNP1Q6NT89 227 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SLC20A1Q8WUM9 679 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 CPA5Q8WXQ8 436 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 BIRC7Q96CA5 298 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 PGAP3Q96FM1 320 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-219ENST00000491183 TBCBQ99426 244 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 TKTL2Q9H0I9 626 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SIK2Q9H0K1 926 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 WDCPQ9H6R7 721 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 RRN3Q9NYV6 651 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SERGEFQ9UGK8 458 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 TMEM59LQ9UK28 342 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 NOCTQ9UK39 431 aaKnown RBP18.55■□□□□ 0.56
HMGN1-219ENST00000491183 WASF3Q9UPY6 502 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-219ENST00000491183 OR51B4Q9Y5P0 310 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 SNX10Q9Y5X0 201 aa18.55■□□□□ 0.56
HMGN1-219ENST00000491183 TPRP12270 2363 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms