RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DNAJB7Q7Z6W7 309 aaPredicted RBP23.43■■□□□ 1.34
USF3-203ENST00000491165 ZBED8Q8IZ13 594 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 SCML4Q8N228 414 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 EDEM1Q92611 657 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 PSMG2Q969U7 264 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 HAUS1Q96CS2 278 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 IGFLR1Q9H665 355 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 ZNF334Q9HCZ1 680 aaPredicted RBP23.43■■□□□ 1.34
USF3-203ENST00000491165 A0A1W2PQH9 124 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 LRRD1A4D1F6 860 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 CDKN2BP42772 138 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 SNX16P57768 344 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 YWHAZP63104 245 aaKnown RBP23.42■■□□□ 1.34
USF3-203ENST00000491165 TCEAL5Q5H9L2 206 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 RGS9BPQ6ZS82 235 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 FBXO32Q969P5 355 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 FBXO44Q9H4M3 255 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 EBF2Q9HAK2 575 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 HCFC1R1Q9NWW0 138 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 NUDT5Q9UKK9 219 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 DENND4CQ5VZ89 1909 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 C2orf16Q68DN1 1984 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 SGK1O00141 431 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 LINC01565O15544 149 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 GLP2RO95838 553 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 LTFP02788 710 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 HYAL1Q12794 435 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 PLD1Q13393 1074 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 C15orf59Q2T9L4 293 aaPredicted RBP23.42■■□□□ 1.34
USF3-203ENST00000491165 BSPRYQ5W0U4 402 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 TXNRD3NBQ6F5E7 133 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 CCDC149Q6ZUS6 474 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 DEFB106AQ8N104 65 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 NIPA2Q8N8Q9 360 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 AGAP11Q8TF27 550 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 RXFP2Q8WXD0 754 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 N4BP2L2Q92802 583 aaPredicted RBP23.42■■□□□ 1.34
USF3-203ENST00000491165 ACSF2Q96CM8 615 aaPredicted RBP23.42■■□□□ 1.34
USF3-203ENST00000491165 SLC24A2Q9UI40 661 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 PHTF1Q9UMS5 762 aa23.42■■□□□ 1.34
USF3-203ENST00000491165 HGSO14964 777 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 UNC5CO95185 931 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 RTN3O95197 1032 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 LRG1P02750 347 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 SCNN1AP37088 669 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 MSH2P43246 934 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 DNAJC3Q13217 504 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 EFHC1Q5JVL4 640 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 TMEM150AQ86TG1 271 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 PRCCQ92733 491 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 STAMBPL1Q96FJ0 436 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 MYRFLQ96LU7 910 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 TMEM121Q9BTD3 319 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 KIF9Q9HAQ2 790 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 TXLNGQ9NUQ3 528 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 IFNB1P01574 187 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 CSH1P0DML2 217 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 CSH2P0DML3 217 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 EPHB3P54753 998 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 YWHAGP61981 247 aaKnown RBP eCLIP23.41■■□□□ 1.34
USF3-203ENST00000491165 PDIA2Q13087 525 aaKnown RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 SETDB1Q15047 1291 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 RASA2Q15283 850 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 PDK4Q16654 411 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 CCDC14Q49A88 953 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 PPM1LQ5SGD2 360 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 OTUD1Q5VV17 481 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 CAPN12Q6ZSI9 719 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 HS6ST3Q8IZP7 471 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 C4orf33Q8N1A6 199 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 ARFGAP1Q8N6T3 406 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 C12orf76Q8N812 135 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 LRRC3Q9BY71 257 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 NSUN3Q9H649 340 aaKnown RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 POPDC2Q9HBU9 364 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 PSMC3IPQ9P2W1 217 aaPredicted RBP23.41■■□□□ 1.34
USF3-203ENST00000491165 STK38LQ9Y2H1 464 aa23.41■■□□□ 1.34
USF3-203ENST00000491165 PDGFRAP16234 1089 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 DCAF6Q58WW2 860 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 PCGF5Q86SE9 256 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 IRGQQ8WZA9 623 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 CEP295NLQ96MC4 621 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 SLC2A13Q96QE2 648 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 TRIM33Q9UPN9 1127 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 MTCH2Q9Y6C9 303 aa23.4■■□□□ 1.34
USF3-203ENST00000491165 CA4P22748 312 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 RPA3P35244 121 aaPredicted RBP23.39■■□□□ 1.34
USF3-203ENST00000491165 ATXN1P54253 815 aaKnown RBP23.39■■□□□ 1.34
USF3-203ENST00000491165 ACCSLQ4AC99 568 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 TLDC1Q6P9B6 456 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 POLNQ7Z5Q5 900 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 TMC8Q8IU68 726 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 SLC35B2Q8TB61 432 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 IL21Q9HBE4 155 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 L3MBTL1Q9Y468 752 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 USH1CQ9Y6N9 552 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 BRWD1Q9NSI6 2320 aa23.39■■□□□ 1.34
USF3-203ENST00000491165 TMEM265A0A087WTH1 108 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 C1RP00736 705 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 ZDHHC11BP0C7U3 371 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms