RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 A0A087WXM4 84 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 SORBS2O94875 1100 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CRTAMO95727 393 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 KCNA2P16389 499 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PSMD7P51665 324 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CDH15P55291 814 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 DLG2Q15700 870 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MTG1Q9BT17 334 aaPredicted RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 DGCR6LQ9BY27 220 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 DDIT4Q9NX09 232 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PTTG2Q9NZH5 202 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MYO5AQ9Y4I1 1855 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MGEA5O60502 916 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 TGFB2P61812 414 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 OR52E8Q6IFG1 317 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MAGEE2Q8TD90 523 aaPredicted RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 KCTD4Q8WVF5 259 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 COPG2Q9UBF2 871 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MAN1A2O60476 641 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PLIN3O60664 434 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MYL4P12829 197 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 NCAM1P13591 858 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CCDC130P13994 396 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 GMPRP36959 345 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CSE1LP55060 971 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PPM1LQ5SGD2 360 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF554Q86TJ5 538 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 SYBUQ9NX95 663 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 AKAP11Q9UKA4 1901 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 IL18RAPO95256 599 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 APOA4P06727 396 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 NFICP08651 508 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 GOT1P17174 413 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 FASP25445 335 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 SLC18A1P54219 525 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 GK5Q6ZS86 529 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
SHOX2-205ENST00000490689 HEATR4Q86WZ0 1026 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
SHOX2-205ENST00000490689 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 VNN1O95497 513 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 MT-ND1P03886 318 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 XRCC1P18887 633 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 LRPAP1P30533 357 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 CBX3Q13185 183 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 CYP51A1Q16850 503 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 TMTC4Q5T4D3 741 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 GRTP1Q5TC63 336 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 FIZ1Q96SL8 496 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PORCNQ9H237 461 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 C9JVG2 144 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PSMD12O00232 456 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 SNX2O60749 519 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 VTNP04004 478 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 C2P06681 752 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 TSHRP16473 764 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 NR4A1P22736 598 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 JAG1P78504 1218 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 CASP10Q92851 521 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 CPNE1Q99829 537 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 SYT11Q9BT88 431 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 CDH19Q9H159 772 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 NCF1BA6NI72 391 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 NCF1CA8MVU1 366 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 B4GALT5O43286 388 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 DEAF1O75398 565 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 ATP5BP06576 529 aaKnown RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 NCF1P14598 390 aaPredicted RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 HADHAP40939 763 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 STILQ15468 1287 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PDSS2Q86YH6 399 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 MICU2Q8IYU8 434 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
SHOX2-205ENST00000490689 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms